Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10200

Experiment: R2A with Cesium chloride 3.90625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cesium chloride 3.90625 mM
2,245,337	+				+0.4
2,245,337	+				+1.0
2,245,337	+				+0.6
2,245,338	-				+0.6
2,245,338	-				+2.2
2,245,338	-				+1.1
2,245,338	-				+0.2
2,245,338	-				-1.3
2,245,338	-				+0.6
2,245,338	-				+0.8
2,245,338	-				+0.3
2,245,338	-				+0.3
2,245,535	+				-1.2
2,245,535	+				-0.8
2,245,536	-				+0.4
2,245,536	-				-1.5
2,245,536	-				+1.8
2,245,656	+				+0.8
2,245,656	+				+1.3
2,245,656	+				+0.3
2,245,656	+				+0.1
2,245,656	+				+1.6
2,245,656	+				-1.1
2,245,656	+				-0.9
2,245,656	+				-0.5
2,245,656	+				+0.4
2,245,656	+				-0.5
2,245,656	+				-1.3
2,245,656	+				-0.6
2,245,657	-				-1.0
2,245,657	-				-0.7
2,245,657	-				+0.2
2,245,657	-				-1.3
2,245,657	-				+2.0
2,245,657	-				+0.2
2,245,657	-				-0.5
2,245,657	-				-1.0
2,245,657	-				-0.2
2,245,657	-				-0.5
2,245,657	-				+0.7
2,245,657	-				-1.7
2,245,657	-				+1.8
2,245,657	-				-0.4
2,245,657	-				+0.2
2,245,657	-				-1.4
2,245,657	-				-0.8
2,245,657	-				-0.3
2,245,706	+				+0.7
2,245,706	+				+1.1
2,245,706	+				-1.2
2,245,706	+				+4.4
2,245,706	+				-1.0
2,245,707	-				-0.0
2,245,707	-				-0.0
2,245,707	-				+0.7
2,245,707	-				-0.7
2,245,707	-				-0.1
2,245,776	+				-0.2
2,245,776	+				-1.0
2,245,777	-				-0.1
2,245,777	-				+0.2
2,245,777	-				-0.4
2,245,777	-				+0.2
2,245,848	+				+0.2
2,245,848	+				+1.4
2,245,848	+				-0.1
2,245,848	+				+0.8
2,245,848	+				-1.7
2,245,848	+				+1.2
2,245,848	+				+0.3
2,245,848	+				-0.5
2,245,848	+				-2.2
2,245,848	+				-0.1
2,245,848	+				-1.2
2,245,848	+				+0.1
2,245,848	+				+0.1
2,245,848	+				-0.2
2,245,848	+				-1.1
2,245,848	+				-1.2
2,245,849	-				+1.2
2,245,849	-				-1.1
2,245,849	-				-0.6
2,245,849	-				-0.2
2,245,849	-				+1.5
2,245,849	-				+2.2
2,245,849	-				-1.1
2,245,849	-				+1.6
2,245,849	-				-0.6
2,245,849	-				-1.3
2,245,849	-				-1.5
2,245,849	-				+0.5
2,245,849	-				-2.5
2,245,849	-				-2.6
2,245,849	-				+0.2
2,245,929	+				+0.1
2,245,929	+				-0.5
2,245,929	+				-0.8
2,245,929	+				-1.8
2,245,929	+				+1.5
2,245,929	+				-0.3
2,245,929	+				+0.3
2,245,929	+				-0.2
2,245,929	+				-1.5
2,245,929	+				-0.7
2,245,929	+				-0.5
2,245,930	-				-0.5
2,245,930	-				+0.2
2,245,930	-				-0.2
2,245,930	-				+1.2
2,245,930	-				+0.4
2,245,930	-				-2.8
2,245,930	-				-1.4
2,245,930	-				-0.2
2,245,933	+				-0.2
2,245,933	+				+0.1
2,245,933	+				-0.5
2,245,933	+				-0.9
2,245,933	+				-0.3
2,245,933	+				+0.0
2,245,933	+				-0.3
2,245,933	+				+0.1
2,245,933	+				-0.4
2,245,933	+				-0.7
2,245,933	+				-0.0
2,245,933	+				-0.1
2,245,933	+				+1.1
2,245,933	+				-1.2
2,245,933	+				+0.0
2,245,933	+				-0.4
2,245,933	+				-1.1
2,245,933	+				+0.1
2,245,934	-				-1.2
2,245,934	-				+0.6
2,245,934	-				+0.2
2,245,934	-				+0.8
2,245,934	-				-0.0
2,245,934	-				-0.8
2,245,934	-				-0.3
2,245,934	-				-1.3
2,245,934	-				-0.2
2,245,934	-				-0.5
2,245,934	-				-0.3
2,245,934	-				+0.6
2,245,945	+				+0.2
2,245,945	+				-0.1
2,245,945	+				+1.8
2,245,946	-				+0.1
2,245,946	-				-0.3
2,245,981	+		LRK54_RS10195	0.16	+0.7
2,246,126	+				+0.2
2,246,126	+				-0.9
2,246,126	+				-1.4
2,246,126	+				-1.0
2,246,126	+				+0.4
2,246,126	+				+1.0
2,246,126	+				+0.9
2,246,126	+				+0.6
2,246,126	+				-0.5
2,246,126	+				-1.1
2,246,126	+				+0.4
2,246,126	+				-1.7
2,246,126	+				-0.3
2,246,126	+				+1.0
2,246,126	+				-1.0
2,246,126	-				-0.7
2,246,127	-				+0.8
2,246,127	-				+0.8
2,246,127	-				+0.7
2,246,127	-				+0.4
2,246,127	-				-0.6
2,246,127	-				-0.0
2,246,127	-				+0.8
2,246,127	-				-0.1
2,246,127	-				-1.2
2,246,127	-				+0.2
2,246,127	-				-2.4
2,246,127	-				+0.9
2,246,127	-				-1.2
2,246,127	-				+0.5
2,246,127	-				+0.8
2,246,633	-		LRK54_RS10200	0.16	-1.4
2,246,725	+		LRK54_RS10200	0.19	+0.0
2,246,726	-		LRK54_RS10200	0.19	+1.4
2,246,726	-		LRK54_RS10200	0.19	+0.4
2,246,860	+		LRK54_RS10200	0.24	-0.3
2,246,861	-		LRK54_RS10200	0.24	+0.2
2,246,861	-		LRK54_RS10200	0.24	+0.8
2,246,861	-		LRK54_RS10200	0.24	-0.9
2,246,861	-		LRK54_RS10200	0.24	+1.6
2,247,103	+		LRK54_RS10200	0.33	-0.5
2,247,103	+		LRK54_RS10200	0.33	-1.8
2,247,104	-		LRK54_RS10200	0.33	+0.4
2,247,104	-		LRK54_RS10200	0.33	-1.4
2,247,104	-		LRK54_RS10200	0.33	+0.2
2,247,104	-		LRK54_RS10200	0.33	-0.6
2,247,104	-		LRK54_RS10200	0.33	-1.4
2,247,193	+		LRK54_RS10200	0.37	-0.2
2,247,193	+		LRK54_RS10200	0.37	-0.1
2,247,193	+		LRK54_RS10200	0.37	-0.0
2,247,193	+		LRK54_RS10200	0.37	-0.9
2,247,194	-		LRK54_RS10200	0.37	-0.4
2,247,194	-		LRK54_RS10200	0.37	+0.4
2,247,194	-		LRK54_RS10200	0.37	+0.7
2,247,194	-		LRK54_RS10200	0.37	-1.9
2,247,439	+		LRK54_RS10200	0.46	+1.2
2,247,439	+		LRK54_RS10200	0.46	+0.1
2,247,439	+		LRK54_RS10200	0.46	+1.2
2,247,439	+		LRK54_RS10200	0.46	-0.9
2,247,460	+		LRK54_RS10200	0.47	-1.5
2,247,460	+		LRK54_RS10200	0.47	-0.2
2,247,460	+		LRK54_RS10200	0.47	-1.0
2,247,460	+		LRK54_RS10200	0.47	+0.8
2,247,460	+		LRK54_RS10200	0.47	+0.6
2,247,460	+		LRK54_RS10200	0.47	-1.4
2,247,460	+		LRK54_RS10200	0.47	+0.3
2,247,460	+		LRK54_RS10200	0.47	+0.2
2,247,460	+		LRK54_RS10200	0.47	-0.0
2,247,460	+		LRK54_RS10200	0.47	-1.4
2,247,460	+		LRK54_RS10200	0.47	-1.2
2,247,460	+		LRK54_RS10200	0.47	-0.4
2,247,460	+		LRK54_RS10200	0.47	-0.5
2,247,460	+		LRK54_RS10200	0.47	+0.8
2,247,460	+		LRK54_RS10200	0.47	-1.1
2,247,460	+		LRK54_RS10200	0.47	-1.0
2,247,460	+		LRK54_RS10200	0.47	-0.4
2,247,461	-		LRK54_RS10200	0.47	-0.5
2,247,461	-		LRK54_RS10200	0.47	-0.8
2,247,461	-		LRK54_RS10200	0.47	-0.0
2,247,461	-		LRK54_RS10200	0.47	-1.2
2,247,461	-		LRK54_RS10200	0.47	-0.8
2,247,461	-		LRK54_RS10200	0.47	+0.2
2,247,461	-		LRK54_RS10200	0.47	+0.8
2,247,461	-		LRK54_RS10200	0.47	-1.0
2,247,461	-		LRK54_RS10200	0.47	-0.1
2,247,461	-		LRK54_RS10200	0.47	-0.2
2,247,461	-		LRK54_RS10200	0.47	-1.4
2,247,461	-		LRK54_RS10200	0.47	+0.3
2,247,461	-		LRK54_RS10200	0.47	-0.5
2,247,461	-		LRK54_RS10200	0.47	-0.0
2,247,461	-		LRK54_RS10200	0.47	-1.4
2,247,461	-		LRK54_RS10200	0.47	+0.4
2,247,461	-		LRK54_RS10200	0.47	-1.0
2,247,461	-		LRK54_RS10200	0.47	+0.2
2,247,461	-		LRK54_RS10200	0.47	-0.6
2,247,461	-		LRK54_RS10200	0.47	+1.8
2,247,481	+		LRK54_RS10200	0.47	-0.8
2,247,481	+		LRK54_RS10200	0.47	-0.5
2,247,481	+		LRK54_RS10200	0.47	-0.5
2,247,482	-		LRK54_RS10200	0.48	+0.8
2,247,482	-		LRK54_RS10200	0.48	-2.2
2,247,482	-		LRK54_RS10200	0.48	+0.8
2,247,482	-		LRK54_RS10200	0.48	+0.2
2,247,482	-		LRK54_RS10200	0.48	+0.8
2,247,482	-		LRK54_RS10200	0.48	+0.4
2,247,523	+		LRK54_RS10200	0.49	+0.8
2,247,523	+		LRK54_RS10200	0.49	-0.2
2,247,523	+		LRK54_RS10200	0.49	-1.6
2,247,523	+		LRK54_RS10200	0.49	-1.7
2,247,523	+		LRK54_RS10200	0.49	+0.1
2,247,523	+		LRK54_RS10200	0.49	+0.8
2,247,523	+		LRK54_RS10200	0.49	+0.1
2,247,524	-		LRK54_RS10200	0.49	+0.8
2,247,524	-		LRK54_RS10200	0.49	-0.2
2,247,524	-		LRK54_RS10200	0.49	+1.0
2,247,524	-		LRK54_RS10200	0.49	-0.7
2,247,524	-		LRK54_RS10200	0.49	-1.2
2,247,524	-		LRK54_RS10200	0.49	+0.3
2,247,535	+		LRK54_RS10200	0.50	-1.7
2,247,535	+		LRK54_RS10200	0.50	-0.4
2,247,535	+		LRK54_RS10200	0.50	+0.2
2,247,535	+		LRK54_RS10200	0.50	-0.9
2,247,536	-		LRK54_RS10200	0.50	+2.8
2,247,622	+		LRK54_RS10200	0.53	+0.5
2,247,622	+		LRK54_RS10200	0.53	+0.5
2,247,623	-		LRK54_RS10200	0.53	-1.1
2,247,623	-		LRK54_RS10200	0.53	-0.1
2,247,700	+		LRK54_RS10200	0.56	-0.6
2,247,700	+		LRK54_RS10200	0.56	-1.0
2,247,700	+		LRK54_RS10200	0.56	-0.4
2,247,701	-		LRK54_RS10200	0.56	-0.8
2,247,701	-		LRK54_RS10200	0.56	+0.5
2,247,701	-		LRK54_RS10200	0.56	-2.7
2,247,701	-		LRK54_RS10200	0.56	-0.5
2,247,701	-		LRK54_RS10200	0.56	-0.4
2,247,701	-		LRK54_RS10200	0.56	-1.7
2,247,701	-		LRK54_RS10200	0.56	-1.0
2,247,701	-		LRK54_RS10200	0.56	+0.2
2,247,715	+		LRK54_RS10200	0.56	-1.8
2,247,716	-		LRK54_RS10200	0.56	-0.8
2,247,716	-		LRK54_RS10200	0.56	+1.8
2,247,736	+		LRK54_RS10200	0.57	-2.4
2,247,736	+		LRK54_RS10200	0.57	-1.5
2,247,736	+		LRK54_RS10200	0.57	+0.1
2,247,736	+		LRK54_RS10200	0.57	-0.5
2,247,736	+		LRK54_RS10200	0.57	-1.6
2,247,736	+		LRK54_RS10200	0.57	-1.7
2,247,736	+		LRK54_RS10200	0.57	-0.2
2,247,736	+		LRK54_RS10200	0.57	-1.3
2,247,737	-		LRK54_RS10200	0.57	-1.6
2,247,737	-		LRK54_RS10200	0.57	-2.1
2,247,737	-		LRK54_RS10200	0.57	-0.0
2,247,737	-		LRK54_RS10200	0.57	+0.8
2,247,737	-		LRK54_RS10200	0.57	-1.4
2,247,737	-		LRK54_RS10200	0.57	-1.3
2,247,946	+		LRK54_RS10200	0.65	-3.1
2,247,946	+		LRK54_RS10200	0.65	+1.1
2,247,946	+		LRK54_RS10200	0.65	+0.2
2,247,946	+		LRK54_RS10200	0.65	-0.7
2,247,946	+		LRK54_RS10200	0.65	-0.9
2,247,946	+		LRK54_RS10200	0.65	-1.8
2,247,946	+		LRK54_RS10200	0.65	+0.2
2,247,946	+		LRK54_RS10200	0.65	-0.3
2,247,947	-		LRK54_RS10200	0.65	-3.2
2,247,947	-		LRK54_RS10200	0.65	+0.7
2,247,947	-		LRK54_RS10200	0.65	-0.2
2,247,947	-		LRK54_RS10200	0.65	-0.2
2,247,947	-		LRK54_RS10200	0.65	+0.2
2,247,947	-		LRK54_RS10200	0.65	+0.7
2,247,947	-		LRK54_RS10200	0.65	+0.1
2,247,979	+		LRK54_RS10200	0.66	+0.2
2,247,979	+		LRK54_RS10200	0.66	-0.3
2,247,979	+		LRK54_RS10200	0.66	-0.5
2,247,980	-		LRK54_RS10200	0.66	-0.1
2,247,980	-		LRK54_RS10200	0.66	+0.4
2,248,108	+		LRK54_RS10200	0.71	+0.2
2,248,108	+		LRK54_RS10200	0.71	-0.8
2,248,108	+		LRK54_RS10200	0.71	-0.4
2,248,108	+		LRK54_RS10200	0.71	-1.0
2,248,108	+		LRK54_RS10200	0.71	-2.0
2,248,108	+		LRK54_RS10200	0.71	-1.6
2,248,108	+		LRK54_RS10200	0.71	+0.5
2,248,109	-		LRK54_RS10200	0.71	-0.6
2,248,109	-		LRK54_RS10200	0.71	-0.8
2,248,109	-		LRK54_RS10200	0.71	-0.4
2,248,109	-		LRK54_RS10200	0.71	+0.5
2,248,109	-		LRK54_RS10200	0.71	-0.7
2,248,109	-		LRK54_RS10200	0.71	-1.0
2,248,109	-		LRK54_RS10200	0.71	+1.2
2,248,109	-		LRK54_RS10200	0.71	+1.3
2,248,109	-		LRK54_RS10200	0.71	-0.2
2,248,109	-		LRK54_RS10200	0.71	+0.2
2,248,109	-		LRK54_RS10200	0.71	-0.5
2,248,109	-		LRK54_RS10200	0.71	+1.8
2,248,109	-		LRK54_RS10200	0.71	-0.0
2,248,109	-		LRK54_RS10200	0.71	+0.4
2,248,109	-		LRK54_RS10200	0.71	+0.2
2,248,121	-		LRK54_RS10200	0.72	-1.7
2,248,168	+		LRK54_RS10200	0.73	-0.1
2,248,169	-		LRK54_RS10200	0.73	-0.4
2,248,169	-		LRK54_RS10200	0.73	-0.6
2,248,240	+		LRK54_RS10200	0.76	-0.0
2,248,240	+		LRK54_RS10200	0.76	-2.0
2,248,240	+		LRK54_RS10200	0.76	-0.2
2,248,240	+		LRK54_RS10200	0.76	-0.1
2,248,240	+		LRK54_RS10200	0.76	+0.5
2,248,240	+		LRK54_RS10200	0.76	-0.2
2,248,240	+		LRK54_RS10200	0.76	-0.1
2,248,240	+		LRK54_RS10200	0.76	-0.9
2,248,241	-		LRK54_RS10200	0.76	-2.0
2,248,241	-		LRK54_RS10200	0.76	-0.9
2,248,241	-		LRK54_RS10200	0.76	+0.3
2,248,241	-		LRK54_RS10200	0.76	-0.0
2,248,241	-		LRK54_RS10200	0.76	-0.8
2,248,288	+		LRK54_RS10200	0.78	-0.8
2,248,288	+		LRK54_RS10200	0.78	-0.9
2,248,288	+		LRK54_RS10200	0.78	-2.2
2,248,288	+		LRK54_RS10200	0.78	+0.3
2,248,288	+		LRK54_RS10200	0.78	-2.2
2,248,288	+		LRK54_RS10200	0.78	-0.2
2,248,288	+		LRK54_RS10200	0.78	+0.2
2,248,288	+		LRK54_RS10200	0.78	-0.1
2,248,288	+		LRK54_RS10200	0.78	-0.3
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