Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03368

Experiment: PYE with Chloride 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloride 100 mM
3,544,033	+		CCNA_03366	0.17	+1.1
3,544,082	-		CCNA_03366	0.28	+0.3
3,544,107	+		CCNA_03366	0.34	+0.2
3,544,120	+		CCNA_03366	0.36	-0.6
3,544,120	+		CCNA_03366	0.36	-0.2
3,544,137	+		CCNA_03366	0.40	-0.7
3,544,137	+		CCNA_03366	0.40	+1.1
3,544,137	+		CCNA_03366	0.40	+0.1
3,544,145	-		CCNA_03366	0.42	+0.1
3,544,145	-		CCNA_03366	0.42	+2.1
3,544,147	+		CCNA_03366	0.42	+0.8
3,544,147	+		CCNA_03366	0.42	-0.8
3,544,147	+		CCNA_03366	0.42	+0.5
3,544,154	-		CCNA_03366	0.44	-2.2
3,544,155	-		CCNA_03366	0.44	-0.9
3,544,155	-		CCNA_03366	0.44	+0.1
3,544,155	-		CCNA_03366	0.44	-2.4
3,544,155	-		CCNA_03366	0.44	+1.5
3,544,155	-		CCNA_03366	0.44	+0.5
3,544,169	+		CCNA_03366	0.47	+0.3
3,544,177	-		CCNA_03366	0.49	+1.1
3,544,214	+		CCNA_03366	0.57	-2.2
3,544,255	+		CCNA_03366	0.66	-2.5
3,544,263	-		CCNA_03366	0.68	+2.1
3,544,269	+		CCNA_03366	0.69	-1.1
3,544,293	-		CCNA_03366	0.75	-0.7
3,544,303	+		CCNA_03366	0.77	-0.5
3,544,326	+		CCNA_03366	0.82	+1.0
3,544,326	+		CCNA_03366	0.82	+0.1
3,544,326	+		CCNA_03366	0.82	-0.6
3,544,326	+		CCNA_03366	0.82	+1.1
3,544,326	+		CCNA_03366	0.82	-1.3
3,544,326	+		CCNA_03366	0.82	-0.2
3,544,326	+		CCNA_03366	0.82	+2.2
3,544,326	+		CCNA_03366	0.82	+1.7
3,544,329	-		CCNA_03366	0.83	-1.5
3,544,334	-		CCNA_03366	0.84	+0.5
3,544,334	-		CCNA_03366	0.84	-0.5
3,544,334	-		CCNA_03366	0.84	-2.0
3,544,334	-		CCNA_03366	0.84	+2.1
3,544,334	-		CCNA_03366	0.84	+0.2
3,544,373	+				+3.1
3,544,373	+				-1.7
3,544,381	-				+0.9
3,544,386	-				-0.7
3,544,632	-		CCNA_03367	0.20	+0.1
3,544,638	-		CCNA_03367	0.21	+0.5
3,544,661	+		CCNA_03367	0.26	-2.0
3,544,669	-		CCNA_03367	0.28	-1.2
3,544,677	+		CCNA_03367	0.29	-0.5
3,544,679	-		CCNA_03367	0.30	-1.1
3,544,696	-		CCNA_03367	0.33	-0.6
3,544,699	+		CCNA_03367	0.34	+0.7
3,544,702	-		CCNA_03367	0.34	+0.5
3,544,704	+		CCNA_03367	0.35	-0.8
3,544,709	+		CCNA_03367	0.36	+0.8
3,544,731	+		CCNA_03367	0.40	-1.7
3,544,747	-		CCNA_03367	0.43	+0.7
3,544,814	+		CCNA_03367	0.56	+2.3
3,544,822	-		CCNA_03367	0.58	+2.1
3,544,904	+		CCNA_03367	0.74	+0.0
3,544,905	-		CCNA_03367	0.75	+0.5
3,544,922	+		CCNA_03367	0.78	-0.9
3,544,932	-		CCNA_03367	0.80	+1.1
3,544,994	-				+0.0
3,545,088	+		CCNA_03368	0.14	+1.1
3,545,163	+		CCNA_03368	0.31	-1.1
3,545,208	-		CCNA_03368	0.42	-1.2
3,545,248	+		CCNA_03368	0.51	-0.2
3,545,257	+		CCNA_03368	0.53	-0.0
3,545,265	-		CCNA_03368	0.55	+0.5
3,545,265	-		CCNA_03368	0.55	+0.1
3,545,282	+		CCNA_03368	0.59	+0.1
3,545,290	-		CCNA_03368	0.61	-0.7
3,545,290	-		CCNA_03368	0.61	+0.2
3,545,292	+		CCNA_03368	0.62	+0.2
3,545,294	-		CCNA_03368	0.62	+0.4
3,545,310	+		CCNA_03368	0.66	-1.3
3,545,312	-		CCNA_03368	0.66	+0.7
3,545,316	+		CCNA_03368	0.67	-2.2
3,545,324	+		CCNA_03368	0.69	-0.7
3,545,326	+		CCNA_03368	0.69	-0.1
3,545,332	-		CCNA_03368	0.71	+2.5
3,545,342	-		CCNA_03368	0.73	+1.1
3,545,390	+		CCNA_03368	0.84	-1.6
3,545,398	-		CCNA_03368	0.86	+0.6
3,545,408	-		CCNA_03368	0.89	+0.4
3,545,445	+				-1.7
3,545,445	+				-1.5
3,545,445	+				+0.8
3,545,445	+				+0.7
3,545,453	-				+0.2
3,545,453	-				+2.0
3,545,453	-				+1.4
3,545,453	-				+2.0
3,545,458	-				+1.2
3,545,460	+				-0.5
3,545,468	-				+2.7
3,545,468	-				+2.1
3,545,468	-				+2.2
3,545,470	+				-1.2
3,545,470	+				-0.2
3,545,475	+				-1.2
3,545,478	-				+1.1
3,545,478	-				+1.7
3,545,478	-				+1.5
3,545,478	-				+1.0
3,545,478	-				+1.5
3,545,478	-				+0.4
3,545,478	-				+1.5
3,545,478	-				+1.3
3,545,483	-				-0.3
3,545,485	+				-0.9
3,545,490	+				-2.3
3,545,509	-				+2.0
3,545,509	-				+1.0
3,545,509	-				+0.5
3,545,514	-				+0.2
3,545,529	-		CCNA_03369	0.11	+0.5
3,545,624	+		CCNA_03369	0.27	-2.7
3,545,666	-		CCNA_03369	0.35	+1.2
3,545,672	+		CCNA_03369	0.36	+0.3
3,545,680	-		CCNA_03369	0.37	-0.1
3,545,680	-		CCNA_03369	0.37	+0.5
3,545,688	-		CCNA_03369	0.38	+0.3
3,545,693	-		CCNA_03369	0.39	+1.1
3,545,751	+		CCNA_03369	0.49	-0.1
3,545,761	+		CCNA_03369	0.51	-0.9
3,545,761	+		CCNA_03369	0.51	-0.5
3,545,761	+		CCNA_03369	0.51	-0.2
3,545,770	+		CCNA_03369	0.53	-0.6
3,545,776	-		CCNA_03369	0.54	+0.9
3,545,795	-		CCNA_03369	0.57	+1.8
3,545,805	-		CCNA_03369	0.59	+0.5
3,545,828	-		CCNA_03369	0.63	+0.6
3,545,828	-		CCNA_03369	0.63	+0.6
3,545,852	+		CCNA_03369	0.67	+0.1
3,545,852	+		CCNA_03369	0.67	-0.9
3,545,890	+		CCNA_03369	0.73	-0.2
3,545,923	+		CCNA_03369	0.79	-0.2
3,545,923	+		CCNA_03369	0.79	+0.1
3,545,931	-		CCNA_03369	0.81	+0.9
3,545,931	-		CCNA_03369	0.81	+0.1
3,545,931	-		CCNA_03369	0.81	+2.9
3,545,931	-		CCNA_03369	0.81	+0.2
3,545,974	-		CCNA_03369	0.88	-1.1
3,546,066	+				-1.1
3,546,066	+				-1.2
3,546,066	+				-2.0
3,546,112	+				-1.5
3,546,112	+				-0.2
3,546,119	-				+0.5
3,546,120	-				-0.4
3,546,146	+				+1.1
3,546,154	-				+0.9
3,546,169	+				-0.1
3,546,177	-				-0.7
3,546,177	-				+1.1
3,546,178	-				-0.5
3,546,200	-				+4.1
3,546,304	-		CCNA_03370	0.19	-0.3
3,546,306	+		CCNA_03370	0.19	-0.4
3,546,327	+		CCNA_03370	0.23	-0.7
3,546,327	+		CCNA_03370	0.23	-0.9
3,546,328	+		CCNA_03370	0.23	-1.4
3,546,335	-		CCNA_03370	0.25	-1.9
3,546,335	-		CCNA_03370	0.25	-3.0
3,546,349	-		CCNA_03370	0.27	-1.1
3,546,362	-		CCNA_03370	0.30	-1.1
3,546,383	+		CCNA_03370	0.34	-0.7
3,546,405	-		CCNA_03370	0.38	-0.6
3,546,430	-		CCNA_03370	0.43	+0.5
3,546,432	+		CCNA_03370	0.43	+1.1
3,546,432	+		CCNA_03370	0.43	+0.8
3,546,440	-		CCNA_03370	0.45	-0.9
3,546,441	+		CCNA_03370	0.45	+0.7
3,546,448	+		CCNA_03370	0.46	+0.1
3,546,448	+		CCNA_03370	0.46	-1.5
3,546,456	-		CCNA_03370	0.48	-2.0