Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02106

Experiment: PYE with Chloride 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloride 100 mM
2,252,691	+		CCNA_02104	0.26	-0.7
2,252,705	+		CCNA_02104	0.30	+0.2
2,252,740	-		CCNA_02104	0.40	-1.9
2,252,754	-		CCNA_02104	0.44	-1.4
2,252,791	-		CCNA_02104	0.55	-1.2
2,252,807	-		CCNA_02104	0.60	-0.4
2,252,826	+		CCNA_02104	0.66	+0.1
2,252,842	+		CCNA_02104	0.71	-1.0
2,252,851	-		CCNA_02104	0.73	-2.2
2,252,895	-		CCNA_02104	0.86	+1.1
2,252,930	+				+0.3
2,253,061	+		CCNA_02105	0.15	-1.2
2,253,091	+		CCNA_02105	0.23	-1.0
2,253,099	-		CCNA_02105	0.25	+1.1
2,253,099	-		CCNA_02105	0.25	-0.0
2,253,099	-		CCNA_02105	0.25	-0.2
2,253,128	-		CCNA_02105	0.33	-0.1
2,253,130	+		CCNA_02105	0.33	-0.8
2,253,130	+		CCNA_02105	0.33	-0.2
2,253,138	-		CCNA_02105	0.35	+1.3
2,253,138	-		CCNA_02105	0.35	+1.1
2,253,148	-		CCNA_02105	0.38	+0.8
2,253,149	+		CCNA_02105	0.38	-1.3
2,253,215	-		CCNA_02105	0.55	+0.1
2,253,258	-		CCNA_02105	0.66	-1.8
2,253,268	-		CCNA_02105	0.69	-0.1
2,253,276	-		CCNA_02105	0.71	-0.6
2,253,289	+		CCNA_02105	0.74	-0.4
2,253,324	-		CCNA_02105	0.83	-1.0
2,253,326	+		CCNA_02105	0.84	+1.0
2,253,326	+		CCNA_02105	0.84	+0.8
2,253,331	+				+0.8
2,253,340	+		CCNA_02105	0.87	+1.1
2,253,348	-		CCNA_02105	0.89	-0.2
2,253,348	-		CCNA_02105	0.89	-0.2
2,253,354	+				+0.1
2,253,362	-				+0.3
2,253,426	+				+0.6
2,253,426	+				-1.3
2,253,452	-				-1.7
2,253,454	-				+1.6
2,253,454	-				-0.7
2,253,454	-				-0.2
2,253,488	-				+0.1
2,253,587	+				-0.2
2,253,614	+				-0.2
2,253,614	+				-0.2
2,253,614	+				-1.3
2,253,614	+				+0.1
2,253,614	+				-0.1
2,253,614	+				+0.6
2,253,622	-				+1.6
2,253,622	-				+0.1
2,253,622	-				-1.7
2,253,622	-				-0.3
2,253,622	-				+1.1
2,253,622	-				-1.9
2,253,622	-				+0.1
2,253,622	-				+0.6
2,253,655	+				-0.6
2,253,669	-				-0.4
2,253,684	+				-1.9
2,253,700	-				-0.2
2,253,707	+				+0.6
2,253,715	-				+0.6
2,253,715	-				+0.7
2,253,750	-				+0.2
2,253,750	-				-1.5
2,253,761	+				-1.2
2,253,775	-				+1.1
2,253,819	-				-0.7
2,253,819	-				-0.3
2,253,821	-				+0.7
2,253,828	+				-0.9
2,253,899	-				-0.7
2,253,953	-		CCNA_02106	0.11	-0.6
2,253,954	+		CCNA_02106	0.11	+0.8
2,253,985	-		CCNA_02106	0.12	-0.2
2,254,003	+		CCNA_02106	0.12	+0.6
2,254,010	-		CCNA_02106	0.13	-0.2
2,254,010	-		CCNA_02106	0.13	-1.0
2,254,057	+		CCNA_02106	0.14	+1.1
2,254,076	-		CCNA_02106	0.15	-1.7
2,254,082	+		CCNA_02106	0.15	+1.1
2,254,130	-		CCNA_02106	0.17	-0.9
2,254,151	+		CCNA_02106	0.18	+1.1
2,254,336	+		CCNA_02106	0.24	-0.8
2,254,336	+		CCNA_02106	0.24	-0.3
2,254,336	+		CCNA_02106	0.24	-0.8
2,254,336	+		CCNA_02106	0.24	-0.6
2,254,344	-		CCNA_02106	0.25	-3.1
2,254,344	-		CCNA_02106	0.25	-0.3
2,254,346	+		CCNA_02106	0.25	-1.8
2,254,469	-		CCNA_02106	0.29	-2.0
2,254,469	-		CCNA_02106	0.29	-1.0
2,254,518	+		CCNA_02106	0.31	+0.0
2,254,526	-		CCNA_02106	0.31	-0.3
2,254,526	-		CCNA_02106	0.31	+0.6
2,254,526	-		CCNA_02106	0.31	-0.1
2,254,526	-		CCNA_02106	0.31	+1.0
2,254,526	-		CCNA_02106	0.31	-1.7
2,254,526	-		CCNA_02106	0.31	+0.2
2,254,526	-		CCNA_02106	0.31	-0.7
2,254,537	-		CCNA_02106	0.32	-1.0
2,254,554	-		CCNA_02106	0.32	-0.3
2,254,559	+		CCNA_02106	0.32	-0.2
2,254,578	+		CCNA_02106	0.33	-0.9
2,254,593	-		CCNA_02106	0.34	-0.2
2,254,607	+		CCNA_02106	0.34	+0.9
2,254,615	-		CCNA_02106	0.34	-0.7
2,254,615	-		CCNA_02106	0.34	-0.9
2,254,643	+		CCNA_02106	0.36	-1.0
2,254,645	-		CCNA_02106	0.36	-0.6
2,254,652	-		CCNA_02106	0.36	+0.0
2,254,712	-		CCNA_02106	0.38	-0.7
2,254,712	-		CCNA_02106	0.38	+0.8
2,254,774	+		CCNA_02106	0.40	-0.2
2,254,779	+		CCNA_02106	0.40	-1.2
2,254,779	+		CCNA_02106	0.40	+0.3
2,254,787	-		CCNA_02106	0.41	+1.1
2,254,787	-		CCNA_02106	0.41	-0.2
2,254,798	-		CCNA_02106	0.41	-0.3
2,254,814	+		CCNA_02106	0.42	+1.1
2,254,822	-		CCNA_02106	0.42	-1.9
2,254,827	+		CCNA_02106	0.42	-2.0
2,254,834	-		CCNA_02106	0.42	+0.6
2,254,835	-		CCNA_02106	0.42	+2.1
2,254,837	+		CCNA_02106	0.43	-1.0
2,254,845	-		CCNA_02106	0.43	-0.4
2,254,864	+		CCNA_02106	0.44	-0.6
2,254,872	-		CCNA_02106	0.44	-0.4
2,254,880	-		CCNA_02106	0.44	+1.1
2,254,896	+		CCNA_02106	0.45	+2.1
2,254,904	+		CCNA_02106	0.45	-0.2
2,254,914	+		CCNA_02106	0.45	+2.1
2,254,950	-		CCNA_02106	0.47	-1.4
2,254,956	+		CCNA_02106	0.47	+0.6
2,254,961	+		CCNA_02106	0.47	-0.2
2,254,964	-		CCNA_02106	0.47	+0.3
2,254,969	-		CCNA_02106	0.47	-0.2
2,254,975	+		CCNA_02106	0.48	-0.6
2,254,975	+		CCNA_02106	0.48	-0.2
2,254,975	+		CCNA_02106	0.48	+0.7
2,254,975	+		CCNA_02106	0.48	-1.8
2,254,975	+		CCNA_02106	0.48	+0.9
2,254,975	+		CCNA_02106	0.48	+0.1
2,254,983	-		CCNA_02106	0.48	-0.2
2,254,983	-		CCNA_02106	0.48	-1.2
2,254,983	-		CCNA_02106	0.48	-0.7
2,254,983	-		CCNA_02106	0.48	+0.4
2,254,983	-		CCNA_02106	0.48	-0.9
2,254,991	-		CCNA_02106	0.48	-0.8
2,255,019	+		CCNA_02106	0.49	+1.1
2,255,019	+		CCNA_02106	0.49	+0.6
2,255,019	+		CCNA_02106	0.49	-0.2
2,255,027	-		CCNA_02106	0.49	-1.0
2,255,027	-		CCNA_02106	0.49	-1.4
2,255,027	-		CCNA_02106	0.49	-0.9
2,255,027	-		CCNA_02106	0.49	+0.1
2,255,027	-		CCNA_02106	0.49	-1.0
2,255,071	-		CCNA_02106	0.51	-1.9
2,255,085	+		CCNA_02106	0.52	+0.6
2,255,093	-		CCNA_02106	0.52	-0.8
2,255,101	+		CCNA_02106	0.52	+0.6
2,255,109	-		CCNA_02106	0.52	-1.4
2,255,129	+		CCNA_02106	0.53	-1.3
2,255,129	+		CCNA_02106	0.53	-3.0
2,255,129	-		CCNA_02106	0.53	-2.0
2,255,129	-		CCNA_02106	0.53	-1.6
2,255,137	-		CCNA_02106	0.53	+0.0
2,255,137	-		CCNA_02106	0.53	-0.2
2,255,137	-		CCNA_02106	0.53	+0.1
2,255,161	-		CCNA_02106	0.54	-0.8
2,255,268	-		CCNA_02106	0.58	+2.3
2,255,280	-		CCNA_02106	0.59	-0.7
2,255,286	+		CCNA_02106	0.59	-1.9
2,255,296	+		CCNA_02106	0.59	-0.2
2,255,296	+		CCNA_02106	0.59	+2.1
2,255,304	-		CCNA_02106	0.59	-0.4
2,255,315	+		CCNA_02106	0.60	-0.4
2,255,365	-		CCNA_02106	0.62	-0.6
2,255,412	+		CCNA_02106	0.63	+0.6
2,255,441	-		CCNA_02106	0.64	+0.3
2,255,441	-		CCNA_02106	0.64	-2.3
2,255,449	+		CCNA_02106	0.65	+0.1
2,255,491	+		CCNA_02106	0.66	-1.0
2,255,496	+		CCNA_02106	0.66	+0.1
2,255,499	-		CCNA_02106	0.67	-1.8
2,255,501	+		CCNA_02106	0.67	-1.1
2,255,504	-		CCNA_02106	0.67	-1.4
2,255,504	-		CCNA_02106	0.67	-1.0
2,255,504	-		CCNA_02106	0.67	-0.8
2,255,509	-		CCNA_02106	0.67	-0.9
2,255,509	-		CCNA_02106	0.67	-1.3
2,255,525	+		CCNA_02106	0.67	+0.6
2,255,528	-		CCNA_02106	0.68	-1.9
2,255,533	-		CCNA_02106	0.68	-0.4
2,255,533	-		CCNA_02106	0.68	-1.0
2,255,578	+		CCNA_02106	0.69	-1.0
2,255,586	-		CCNA_02106	0.70	-1.6
2,255,658	-		CCNA_02106	0.72	-1.2
2,255,692	+		CCNA_02106	0.74	+0.6
2,255,700	-		CCNA_02106	0.74	-4.0
2,255,722	-		CCNA_02106	0.75	-0.9
2,255,743	-		CCNA_02106	0.75	-1.3
2,255,750	+		CCNA_02106	0.76	-0.6
2,255,789	+		CCNA_02106	0.77	-0.7
2,255,799	+		CCNA_02106	0.77	-1.9
2,255,873	-		CCNA_02106	0.80	-2.0
2,255,923	+		CCNA_02106	0.82	-1.6
2,255,966	-		CCNA_02106	0.83	-0.4
2,255,985	-		CCNA_02106	0.84	+0.0
2,255,990	-		CCNA_02106	0.84	-0.9
2,256,015	-		CCNA_02106	0.85	-1.3
2,256,094	-		CCNA_02106	0.88	+0.1
2,256,147	+				-0.7
2,256,156	-				+1.1
2,256,186	+				+0.1
2,256,193	+				+0.6
2,256,273	-				-0.4
2,256,289	+				-1.0
2,256,297	-				+0.1
2,256,394	+				-3.4
2,256,402	-				-2.1
2,256,407	-				+0.0
2,256,424	-				+0.5
2,256,476	-				-0.7
2,256,499	-				+0.4
2,256,501	+				+1.1
2,256,509	-				-0.9
2,256,519	+				+1.1
2,256,519	+				-2.4
2,256,519	+				-0.2
2,256,519	+				+0.1
2,256,527	-				-0.8
2,256,527	-				+1.1
2,256,527	-				-0.9
2,256,562	-				+1.1
2,256,562	-				+0.7
2,256,564	-				-0.8
2,256,568	+				-0.9
2,256,568	+				+0.6
2,256,576	-				+1.3
2,256,699	-				-0.7
2,256,712	-				+0.6
2,256,781	-				-0.6
2,256,781	-				-1.3
2,256,782	-				-1.0
2,256,783	+				+1.1
2,256,850	+				-0.7
2,256,864	+				+0.1
2,256,865	+				-1.4
2,256,870	+				-0.9
2,256,871	+				-1.5
2,256,871	+				+0.6
2,256,872	-				-0.2
2,256,894	-				-1.8
2,256,933	-				-1.8
2,256,970	+		CCNA_02108	0.11	-0.7
2,256,991	+		CCNA_02108	0.13	-0.2
2,257,003	+		CCNA_02108	0.14	-1.3
2,257,008	+		CCNA_02108	0.14	-0.2
2,257,011	-		CCNA_02108	0.14	-0.7
2,257,023	-		CCNA_02108	0.15	-0.0
2,257,023	-		CCNA_02108	0.15	-1.0
2,257,023	-		CCNA_02108	0.15	-1.8
2,257,036	-		CCNA_02108	0.16	-0.4
2,257,067	-		CCNA_02108	0.18	+0.1
2,257,067	-		CCNA_02108	0.18	-0.8
2,257,072	-		CCNA_02108	0.19	+1.4
2,257,092	-		CCNA_02108	0.20	-1.7
2,257,124	+		CCNA_02108	0.22	-0.2
2,257,125	-		CCNA_02108	0.22	-0.3
2,257,145	-		CCNA_02108	0.24	+1.4
2,257,165	+		CCNA_02108	0.25	-0.2
2,257,180	+		CCNA_02108	0.26	-1.0
2,257,183	-		CCNA_02108	0.27	+0.8
2,257,188	-		CCNA_02108	0.27	-0.4
2,257,212	+		CCNA_02108	0.29	-1.7
2,257,220	+		CCNA_02108	0.29	-0.4
2,257,239	+		CCNA_02108	0.31	-1.8
2,257,239	+		CCNA_02108	0.31	+2.1
2,257,246	+		CCNA_02108	0.31	+1.1
2,257,247	-		CCNA_02108	0.31	-0.4
2,257,247	-		CCNA_02108	0.31	-1.1
2,257,247	-				+3.1
2,257,306	+		CCNA_02108	0.35	+0.9
2,257,340	-		CCNA_02108	0.38	+0.6
2,257,341	+		CCNA_02108	0.38	-0.0
2,257,349	-		CCNA_02108	0.39	+0.7
2,257,353	+		CCNA_02108	0.39	+0.6
2,257,354	-		CCNA_02108	0.39	-1.1
2,257,381	-		CCNA_02108	0.41	-1.4