Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01509

Experiment: PYE with Chloride 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloride 100 mM
1,618,127	+		CCNA_01507	0.89	-0.7
1,618,136	+				+0.8
1,618,144	-				+0.4
1,618,144	-				-2.1
1,618,157	-				-0.6
1,618,165	+				-0.6
1,618,165	+				-1.0
1,618,191	-				-0.8
1,618,217	+				+0.8
1,618,217	+				+0.1
1,618,225	-				+1.4
1,618,299	+		CCNA_01508	0.12	-0.9
1,618,305	-		CCNA_01508	0.13	-0.5
1,618,316	+		CCNA_01508	0.14	-0.9
1,618,328	+		CCNA_01508	0.16	-0.9
1,618,328	+		CCNA_01508	0.16	-1.6
1,618,328	+		CCNA_01508	0.16	-0.7
1,618,335	+		CCNA_01508	0.16	+0.8
1,618,336	-		CCNA_01508	0.17	+0.4
1,618,336	-		CCNA_01508	0.17	+0.8
1,618,336	-		CCNA_01508	0.17	+0.8
1,618,336	-		CCNA_01508	0.17	-1.0
1,618,345	+		CCNA_01508	0.18	-0.0
1,618,363	-		CCNA_01508	0.20	-0.7
1,618,368	-		CCNA_01508	0.21	+1.2
1,618,413	+		CCNA_01508	0.26	-0.4
1,618,421	-		CCNA_01508	0.27	+0.3
1,618,421	-		CCNA_01508	0.27	+0.7
1,618,421	-		CCNA_01508	0.27	-1.4
1,618,469	+		CCNA_01508	0.33	-0.2
1,618,469	+		CCNA_01508	0.33	+0.4
1,618,484	-		CCNA_01508	0.35	-0.6
1,618,485	-		CCNA_01508	0.35	+0.8
1,618,485	-		CCNA_01508	0.35	-0.2
1,618,492	-		CCNA_01508	0.36	-0.7
1,618,509	+		CCNA_01508	0.39	-1.5
1,618,517	+		CCNA_01508	0.40	+1.4
1,618,570	+		CCNA_01508	0.46	+1.2
1,618,593	-		CCNA_01508	0.49	+0.0
1,618,600	+		CCNA_01508	0.50	+0.1
1,618,624	+		CCNA_01508	0.53	-0.2
1,618,624	+		CCNA_01508	0.53	-2.2
1,618,624	+		CCNA_01508	0.53	-0.5
1,618,632	-		CCNA_01508	0.54	+1.1
1,618,658	+		CCNA_01508	0.58	+1.0
1,618,691	+		CCNA_01508	0.62	-0.7
1,618,699	-		CCNA_01508	0.63	-0.7
1,618,706	+		CCNA_01508	0.64	-1.0
1,618,749	-		CCNA_01508	0.69	+0.8
1,618,754	-		CCNA_01508	0.70	-0.2
1,618,782	-		CCNA_01508	0.73	-0.5
1,618,819	+				+1.4
1,618,822	-		CCNA_01508	0.78	-0.6
1,618,844	+		CCNA_01508	0.81	-1.3
1,618,852	-		CCNA_01508	0.82	+1.2
1,618,859	-		CCNA_01508	0.83	+2.1
1,618,861	-		CCNA_01508	0.83	+0.0
1,618,951	-				+0.2
1,618,951	-				+4.0
1,618,951	-				+0.6
1,618,951	-				-0.2
1,618,951	-				+0.1
1,618,959	+				+0.4
1,618,996	-				+1.5
1,619,025	+				-0.7
1,619,031	-				-0.1
1,619,047	+				-0.6
1,619,047	+				+2.4
1,619,078	+				+0.4
1,619,079	-				-0.3
1,619,091	+				-0.2
1,619,116	+				+0.1
1,619,119	-				+2.0
1,619,119	-				+1.0
1,619,119	-				+2.0
1,619,119	-				+1.2
1,619,171	-				+0.8
1,619,274	-		CCNA_01509	0.16	+0.8
1,619,274	-		CCNA_01509	0.16	-0.1
1,619,279	+		CCNA_01509	0.16	+0.8
1,619,287	+		CCNA_01509	0.17	+0.4
1,619,287	-		CCNA_01509	0.17	-0.4
1,619,287	-		CCNA_01509	0.17	+1.9
1,619,287	-		CCNA_01509	0.17	+1.1
1,619,287	-		CCNA_01509	0.17	+0.6
1,619,295	-		CCNA_01509	0.18	+1.1
1,619,351	+		CCNA_01509	0.23	-0.2
1,619,370	+		CCNA_01509	0.24	+0.8
1,619,376	-		CCNA_01509	0.25	+1.2
1,619,433	-		CCNA_01509	0.30	-0.9
1,619,433	-		CCNA_01509	0.30	-0.8
1,619,469	-		CCNA_01509	0.33	+0.6
1,619,539	-		CCNA_01509	0.39	+0.4
1,619,539	-		CCNA_01509	0.39	+0.3
1,619,588	+		CCNA_01509	0.44	-1.0
1,619,652	+		CCNA_01509	0.50	+0.8
1,619,653	-		CCNA_01509	0.50	-1.2
1,619,660	+		CCNA_01509	0.50	-0.9
1,619,668	-		CCNA_01509	0.51	+0.1
1,619,685	+		CCNA_01509	0.53	+0.4
1,619,729	-		CCNA_01509	0.56	+0.8
1,619,745	-		CCNA_01509	0.58	+1.1
1,619,784	+		CCNA_01509	0.61	-1.2
1,619,808	-		CCNA_01509	0.64	-1.4
1,619,842	-		CCNA_01509	0.67	+1.1
1,619,842	-		CCNA_01509	0.67	+2.1
1,619,978	-		CCNA_01509	0.79	+0.3
1,620,062	+		CCNA_01509	0.86	+0.7
1,620,070	-		CCNA_01509	0.87	-0.2
1,620,075	-		CCNA_01509	0.87	+2.2
1,620,108	+				+0.7
1,620,108	+				+0.2
1,620,116	-				+0.3
1,620,116	-				+0.2
1,620,138	+				+1.3
1,620,164	+				-0.6
1,620,174	+				+0.5
1,620,177	+				+0.1
1,620,177	+				+0.4
1,620,177	+				+1.4
1,620,179	+				+2.4
1,620,187	-				+1.5
1,620,187	-				-0.0
1,620,243	-				+0.3
1,620,247	+				+0.2
1,620,295	-				-1.0
1,620,302	+				-1.2
1,620,330	-				+0.6
1,620,462	-				-1.0
1,620,477	-				-0.6
1,620,480	+				-0.7
1,620,480	+				-0.9
1,620,480	+				+1.0
1,620,488	-				-0.2
1,620,488	-				-0.7
1,620,488	-				-1.2
1,620,488	-				-0.4
1,620,493	-				+2.4
1,620,504	+				+2.4
1,620,514	+				-0.3
1,620,582	+		CCNA_01510	0.26	+0.1
1,620,590	-		CCNA_01510	0.28	+2.0
1,620,590	-		CCNA_01510	0.28	+2.4
1,620,591	-		CCNA_01510	0.28	+0.1
1,620,686	+		CCNA_01510	0.53	+0.8
1,620,736	+		CCNA_01510	0.66	-0.2
1,620,741	+		CCNA_01510	0.67	+1.4
1,620,754	-		CCNA_01510	0.71	-0.6
1,620,794	-		CCNA_01510	0.81	-0.2
1,620,821	-		CCNA_01510	0.88	+0.4
1,620,821	-		CCNA_01510	0.88	+0.0
1,620,821	-		CCNA_01510	0.88	+0.8
1,620,919	+				-0.7
1,620,958	+		CCNA_01511	0.10	-1.6
1,620,958	+		CCNA_01511	0.10	-0.4
1,620,958	+		CCNA_01511	0.10	+0.4
1,620,964	+		CCNA_01511	0.11	+0.4
1,620,966	-		CCNA_01511	0.11	-0.2
1,620,966	-		CCNA_01511	0.11	+0.8
1,620,966	-		CCNA_01511	0.11	-1.4
1,621,002	+		CCNA_01511	0.15	-0.6
1,621,002	+		CCNA_01511	0.15	-0.7
1,621,002	+		CCNA_01511	0.15	-0.4
1,621,002	+		CCNA_01511	0.15	-1.0
1,621,005	-		CCNA_01511	0.15	+0.8
1,621,007	+		CCNA_01511	0.16	+1.4
1,621,007	+		CCNA_01511	0.16	-0.4
1,621,007	+		CCNA_01511	0.16	+0.1
1,621,007	+		CCNA_01511	0.16	-0.4
1,621,010	-		CCNA_01511	0.16	-1.3
1,621,013	+		CCNA_01511	0.16	-0.6
1,621,015	-		CCNA_01511	0.17	+0.8
1,621,015	-		CCNA_01511	0.17	-1.7
1,621,015	-		CCNA_01511	0.17	+2.4
1,621,044	+		CCNA_01511	0.20	+0.3
1,621,051	-		CCNA_01511	0.20	-0.4
1,621,063	+		CCNA_01511	0.22	+0.4
1,621,085	-		CCNA_01511	0.24	-0.9
1,621,109	+		CCNA_01511	0.27	-0.2
1,621,109	+		CCNA_01511	0.27	-1.0
1,621,135	-		CCNA_01511	0.30	-0.2
1,621,137	-		CCNA_01511	0.30	-1.5
1,621,142	+		CCNA_01511	0.31	-1.6