Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2960
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,731,879 | + | -0.7 | |||
| 3,732,201 | + | DvMF_2959 | 0.70 | -0.6 | |
| 3,732,247 | + | DvMF_2959 | 0.81 | -1.3 | |
| 3,732,375 | - | -0.4 | |||
| 3,732,823 | - | DvMF_2960 | 0.17 | -1.3 | |
| 3,733,282 | - | DvMF_2960 | 0.65 | -4.5 | |
| 3,733,284 | + | DvMF_2960 | 0.65 | -3.8 | |
| 3,733,445 | - | DvMF_2960 | 0.82 | -1.8 | |
| 3,733,470 | + | DvMF_2960 | 0.85 | -0.6 | |
| 3,733,559 | - | -1.5 | |||
| 3,733,748 | - | -1.5 | |||
| 3,733,781 | - | -2.5 | |||
| 3,733,781 | - | -1.6 | |||
| 3,733,791 | - | -0.1 | |||
| 3,733,965 | + | -0.9 | |||
| 3,733,965 | + | +0.2 | |||
| 3,734,084 | + | -4.1 | |||
| 3,734,258 | - | -0.7 | |||
| 3,734,387 | + | -0.2 | |||
| 3,734,395 | - | -1.0 | |||
| 3,734,395 | - | -0.6 | |||
| 3,734,467 | - | -0.0 | |||
| 3,734,484 | + | -0.3 | |||
| 3,734,500 | - | -1.6 |
Or see this region's nucleotide sequence