Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2818

Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
3,562,448	+				-1.3
3,562,448	+				-0.1
3,562,466	-				-0.5
3,562,935	+				-0.7
3,563,007	+				-0.9
3,563,015	-				-1.4
3,563,015	-				+0.4
3,563,023	+				+0.0
3,563,024	+				-0.2
3,563,238	+		DvMF_2817	0.72	+0.2
3,563,253	+		DvMF_2817	0.77	-2.3
3,563,253	+		DvMF_2817	0.77	-0.6
3,563,261	-		DvMF_2817	0.79	-0.6
3,563,261	-		DvMF_2817	0.79	-4.1
3,563,261	-		DvMF_2817	0.79	-1.8
3,563,323	-				-2.4
3,563,330	+				-3.9
3,563,338	-				-0.6
3,563,501	+		DvMF_2818	0.25	+0.4
3,563,806	-		DvMF_2818	0.73	-0.7
3,563,852	-		DvMF_2818	0.80	-0.5
3,564,249	-				-1.2
3,564,267	+				+0.2
3,564,267	+				-1.0
3,564,275	-				-1.4
3,564,275	-				-2.4
3,564,296	-				-0.7
3,564,348	+				-3.2
3,564,383	+				-1.1
3,564,386	-				-1.0
3,564,484	-		DvMF_2819	0.16	-0.7
3,564,553	-		DvMF_2819	0.22	-3.9
3,564,553	-		DvMF_2819	0.22	-1.0
3,564,707	+		DvMF_2819	0.36	-5.0
3,564,789	-		DvMF_2819	0.43	-0.4
3,564,805	+		DvMF_2819	0.44	+1.0
3,564,853	-		DvMF_2819	0.49	-0.5
3,564,869	-		DvMF_2819	0.50	-0.8