Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2802 and DvMF_2803 are separated by 135 nucleotides DvMF_2803 and DvMF_2804 are separated by 121 nucleotides DvMF_2804 and DvMF_2805 are separated by 132 nucleotides
DvMF_2802: DvMF_2802 - transport-associated (RefSeq), at 3,545,474 to 3,546,028
_2802
DvMF_2803: DvMF_2803 - Rubredoxin-type Fe(Cys)4 protein (RefSeq), at 3,546,164 to 3,546,322
_2803
DvMF_2804: DvMF_2804 - chromate transporter, chromate ion transporter (CHR) family (RefSeq), at 3,546,444 to 3,547,856
_2804
DvMF_2805: DvMF_2805 - ChrB protein (RefSeq), at 3,547,989 to 3,549,080
_2805
Position (kb)
3546
3547
3548 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3545.560 kb on + strand, within DvMF_2802 at 3545.603 kb on + strand, within DvMF_2802 at 3545.608 kb on + strand, within DvMF_2802 at 3545.642 kb on - strand, within DvMF_2802 at 3545.673 kb on + strand, within DvMF_2802 at 3545.680 kb on + strand, within DvMF_2802 at 3545.764 kb on + strand, within DvMF_2802 at 3545.764 kb on + strand, within DvMF_2802 at 3545.772 kb on - strand, within DvMF_2802 at 3545.772 kb on - strand, within DvMF_2802 at 3545.796 kb on + strand, within DvMF_2802 at 3545.860 kb on + strand, within DvMF_2802 at 3545.883 kb on + strand, within DvMF_2802 at 3545.883 kb on + strand, within DvMF_2802 at 3545.906 kb on - strand, within DvMF_2802 at 3545.914 kb on - strand, within DvMF_2802 at 3546.044 kb on + strand at 3546.202 kb on - strand, within DvMF_2803 at 3546.356 kb on - strand at 3546.578 kb on + strand at 3546.581 kb on - strand at 3546.583 kb on + strand at 3546.850 kb on + strand, within DvMF_2804 at 3546.902 kb on + strand, within DvMF_2804 at 3546.978 kb on + strand, within DvMF_2804 at 3546.993 kb on + strand, within DvMF_2804 at 3547.021 kb on - strand, within DvMF_2804 at 3547.492 kb on + strand, within DvMF_2804 at 3547.492 kb on + strand, within DvMF_2804 at 3547.500 kb on - strand, within DvMF_2804 at 3547.663 kb on - strand, within DvMF_2804 at 3548.119 kb on - strand, within DvMF_2805 at 3548.125 kb on - strand, within DvMF_2805 at 3548.133 kb on - strand, within DvMF_2805 at 3548.187 kb on + strand, within DvMF_2805 at 3548.192 kb on + strand, within DvMF_2805 at 3548.559 kb on - strand, within DvMF_2805 at 3548.791 kb on + strand, within DvMF_2805
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Doxycycline hyclate 0.0156 mg/ml remove 3,545,560 + DvMF_2802 0.15 -1.1 3,545,603 + DvMF_2802 0.23 +0.1 3,545,608 + DvMF_2802 0.24 -3.3 3,545,642 - DvMF_2802 0.30 -0.7 3,545,673 + DvMF_2802 0.36 -2.0 3,545,680 + DvMF_2802 0.37 +1.4 3,545,764 + DvMF_2802 0.52 -1.9 3,545,764 + DvMF_2802 0.52 -0.4 3,545,772 - DvMF_2802 0.54 -0.4 3,545,772 - DvMF_2802 0.54 -1.9 3,545,796 + DvMF_2802 0.58 -1.7 3,545,860 + DvMF_2802 0.70 -0.7 3,545,883 + DvMF_2802 0.74 -0.0 3,545,883 + DvMF_2802 0.74 -1.5 3,545,906 - DvMF_2802 0.78 -2.1 3,545,914 - DvMF_2802 0.79 +0.1 3,546,044 + -4.1 3,546,202 - DvMF_2803 0.24 +0.3 3,546,356 - -1.6 3,546,578 + -1.7 3,546,581 - -3.9 3,546,583 + -0.7 3,546,850 + DvMF_2804 0.29 -1.7 3,546,902 + DvMF_2804 0.32 +0.5 3,546,978 + DvMF_2804 0.38 -1.0 3,546,993 + DvMF_2804 0.39 -1.4 3,547,021 - DvMF_2804 0.41 +1.2 3,547,492 + DvMF_2804 0.74 +0.8 3,547,492 + DvMF_2804 0.74 -0.9 3,547,500 - DvMF_2804 0.75 -0.2 3,547,663 - DvMF_2804 0.86 -1.8 3,548,119 - DvMF_2805 0.12 -1.3 3,548,125 - DvMF_2805 0.12 -0.7 3,548,133 - DvMF_2805 0.13 -2.2 3,548,187 + DvMF_2805 0.18 -0.7 3,548,192 + DvMF_2805 0.19 -2.7 3,548,559 - DvMF_2805 0.52 -1.0 3,548,791 + DvMF_2805 0.73 -2.3
Or see this region's nucleotide sequence