Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2372
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,992,026 | - | +0.1 | |||
| 2,992,655 | + | prfC | DvMF_2372 | 0.11 | -5.0 |
| 2,992,957 | + | prfC | DvMF_2372 | 0.30 | -1.1 |
| 2,992,976 | + | prfC | DvMF_2372 | 0.31 | -1.4 |
| 2,992,981 | + | prfC | DvMF_2372 | 0.32 | -1.8 |
| 2,992,984 | - | prfC | DvMF_2372 | 0.32 | -3.6 |
| 2,993,425 | - | prfC | DvMF_2372 | 0.60 | -0.5 |
| 2,993,543 | - | prfC | DvMF_2372 | 0.67 | -1.1 |
| 2,993,632 | - | prfC | DvMF_2372 | 0.73 | -0.8 |
| 2,993,758 | - | prfC | DvMF_2372 | 0.81 | +0.2 |
| 2,994,087 | - | -4.5 | |||
| 2,994,342 | - | -0.0 | |||
| 2,994,476 | + | -1.1 | |||
| 2,994,694 | + | -1.0 | |||
| 2,994,757 | + | -2.1 | |||
| 2,994,897 | + | DvMF_2373 | 0.12 | -0.2 |
Or see this region's nucleotide sequence