Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2265
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,844,828 | - | DvMF_2264 | 0.26 | -0.7 | |
2,844,840 | + | DvMF_2264 | 0.28 | -0.5 | |
2,844,918 | - | DvMF_2264 | 0.35 | +0.2 | |
2,844,943 | - | DvMF_2264 | 0.38 | +0.3 | |
2,844,944 | - | DvMF_2264 | 0.38 | -0.0 | |
2,845,101 | + | DvMF_2264 | 0.54 | -1.9 | |
2,845,125 | + | DvMF_2264 | 0.56 | -0.0 | |
2,845,125 | + | DvMF_2264 | 0.56 | -0.7 | |
2,845,125 | + | DvMF_2264 | 0.56 | -0.7 | |
2,845,133 | - | DvMF_2264 | 0.57 | -3.7 | |
2,845,276 | - | DvMF_2264 | 0.72 | -0.0 | |
2,845,376 | + | DvMF_2264 | 0.82 | -4.6 | |
2,845,501 | + | -0.2 | |||
2,845,604 | - | -0.3 | |||
2,845,678 | + | +0.7 | |||
2,845,720 | + | +0.1 | |||
2,845,952 | + | DvMF_2265 | 0.29 | -0.9 | |
2,845,952 | + | DvMF_2265 | 0.29 | -1.4 | |
2,845,971 | - | DvMF_2265 | 0.31 | -1.9 | |
2,847,030 | + | DvMF_2266 | 0.17 | -0.7 | |
2,847,042 | + | DvMF_2266 | 0.18 | -1.0 | |
2,847,103 | - | DvMF_2266 | 0.22 | -0.8 | |
2,847,283 | - | DvMF_2266 | 0.33 | -2.5 |
Or see this region's nucleotide sequence