Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2262
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,840,509 | - | DvMF_2261 | 0.36 | +0.5 | |
2,840,811 | + | DvMF_2261 | 0.64 | -1.0 | |
2,840,843 | + | DvMF_2261 | 0.67 | -0.7 | |
2,840,993 | - | DvMF_2261 | 0.81 | -0.6 | |
2,841,168 | - | -1.7 | |||
2,841,205 | + | -1.3 | |||
2,841,269 | - | -5.0 | |||
2,841,320 | - | -0.4 | |||
2,841,446 | - | DvMF_2262 | 0.12 | -0.8 | |
2,841,512 | + | DvMF_2262 | 0.20 | -1.0 | |
2,841,613 | + | DvMF_2262 | 0.31 | -3.9 | |
2,841,621 | - | DvMF_2262 | 0.32 | -1.0 | |
2,841,699 | - | DvMF_2262 | 0.41 | -2.6 | |
2,841,754 | + | DvMF_2262 | 0.47 | -1.7 | |
2,841,754 | + | DvMF_2262 | 0.47 | -0.1 | |
2,841,754 | + | DvMF_2262 | 0.47 | -2.4 | |
2,841,754 | + | DvMF_2262 | 0.47 | -1.0 | |
2,841,762 | - | DvMF_2262 | 0.48 | -2.3 | |
2,841,762 | - | DvMF_2262 | 0.48 | -1.2 | |
2,841,813 | + | DvMF_2262 | 0.54 | -1.2 | |
2,841,939 | - | DvMF_2262 | 0.68 | -1.1 | |
2,842,002 | - | DvMF_2262 | 0.76 | -1.0 | |
2,842,369 | - | -4.2 | |||
2,842,429 | + | -0.5 | |||
2,842,484 | + | -0.9 |
Or see this region's nucleotide sequence