Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1730
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,113,740 | - | DvMF_1729 | 0.71 | -1.6 | |
2,113,864 | - | DvMF_1729 | 0.77 | +0.0 | |
2,113,885 | + | DvMF_1729 | 0.78 | -0.9 | |
2,113,898 | - | DvMF_1729 | 0.78 | -0.4 | |
2,114,010 | - | DvMF_1729 | 0.83 | -2.8 | |
2,114,130 | - | DvMF_1729 | 0.88 | -2.9 | |
2,114,149 | - | DvMF_1729 | 0.89 | -1.4 | |
2,114,352 | + | +1.7 | |||
2,115,126 | + | DvMF_1730 | 0.32 | -1.0 | |
2,115,205 | + | DvMF_1730 | 0.37 | -1.6 | |
2,115,205 | + | DvMF_1730 | 0.37 | -2.9 | |
2,115,205 | + | DvMF_1730 | 0.37 | -0.8 | |
2,115,205 | + | DvMF_1730 | 0.37 | -4.7 | |
2,115,213 | - | DvMF_1730 | 0.38 | -0.0 | |
2,115,213 | - | DvMF_1730 | 0.38 | +0.5 | |
2,115,223 | + | DvMF_1730 | 0.38 | -0.1 | |
2,115,402 | - | DvMF_1730 | 0.50 | +0.0 | |
2,115,504 | + | DvMF_1730 | 0.57 | -2.7 | |
2,115,681 | - | DvMF_1730 | 0.68 | -0.6 | |
2,115,766 | - | DvMF_1730 | 0.74 | -1.7 | |
2,115,766 | - | DvMF_1730 | 0.74 | -0.4 | |
2,115,922 | - | DvMF_1730 | 0.84 | -1.0 | |
2,116,113 | + | -0.9 | |||
2,116,701 | - | DvMF_1731 | 0.51 | -1.5 | |
2,116,711 | - | DvMF_1731 | 0.53 | +0.3 | |
2,116,725 | - | DvMF_1731 | 0.57 | -1.0 | |
2,117,132 | - | DvMF_1732 | 0.24 | -0.9 |
Or see this region's nucleotide sequence