Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1531
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,887,743 | + | DvMF_1530 | 0.81 | -0.5 | |
| 1,887,953 | + | DvMF_1530 | 0.89 | -1.6 | |
| 1,888,073 | - | +1.1 | |||
| 1,888,332 | - | -3.8 | |||
| 1,888,446 | - | -1.6 | |||
| 1,888,478 | + | -1.2 | |||
| 1,888,500 | - | -0.5 | |||
| 1,888,500 | - | -0.3 | |||
| 1,888,638 | - | +0.2 | |||
| 1,888,680 | - | -0.8 | |||
| 1,888,754 | - | DvMF_1531 | 0.41 | -1.2 | |
| 1,889,009 | + | -4.0 | |||
| 1,889,041 | - | -2.8 | |||
| 1,889,079 | - | -1.5 | |||
| 1,889,374 | - | DvMF_1532 | 0.23 | -0.1 | |
| 1,889,482 | + | DvMF_1532 | 0.32 | -4.1 | |
| 1,889,482 | + | DvMF_1532 | 0.32 | -1.1 | |
| 1,889,507 | + | DvMF_1532 | 0.34 | -1.1 | |
| 1,889,533 | - | DvMF_1532 | 0.37 | -0.6 | |
| 1,889,558 | - | DvMF_1532 | 0.39 | -1.3 | |
| 1,889,723 | - | DvMF_1532 | 0.52 | -1.0 | |
| 1,889,863 | + | DvMF_1532 | 0.64 | -3.1 |
Or see this region's nucleotide sequence