Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1367
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,674,973 | + | -0.3 | |||
1,674,975 | - | -1.6 | |||
1,675,010 | - | DvMF_1366 | 0.14 | -1.7 | |
1,675,047 | - | DvMF_1366 | 0.19 | -2.2 | |
1,675,204 | + | DvMF_1366 | 0.39 | -0.4 | |
1,675,298 | + | DvMF_1366 | 0.51 | -1.9 | |
1,675,318 | + | DvMF_1366 | 0.54 | -1.7 | |
1,675,493 | - | DvMF_1366 | 0.76 | -1.3 | |
1,675,685 | - | -1.1 | |||
1,675,947 | - | DvMF_1367 | 0.31 | -1.3 | |
1,676,002 | - | DvMF_1367 | 0.38 | -1.8 | |
1,676,075 | + | DvMF_1367 | 0.48 | -1.3 | |
1,676,129 | + | DvMF_1367 | 0.55 | -0.0 | |
1,676,177 | + | DvMF_1367 | 0.61 | -4.4 | |
1,676,299 | - | DvMF_1367 | 0.77 | -1.6 | |
1,676,304 | - | DvMF_1367 | 0.78 | +0.4 | |
1,676,332 | + | DvMF_1367 | 0.81 | -1.4 | |
1,676,582 | - | -0.5 | |||
1,676,685 | + | +0.3 | |||
1,676,873 | - | +0.5 | |||
1,676,959 | - | DvMF_1368 | 0.24 | -0.7 | |
1,677,115 | + | DvMF_1368 | 0.73 | +0.8 |
Or see this region's nucleotide sequence