Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1154
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,415,160 | - | DvMF_1153 | 0.41 | -0.2 | |
1,415,264 | - | DvMF_1153 | 0.49 | -0.4 | |
1,415,293 | + | DvMF_1153 | 0.51 | -0.6 | |
1,415,331 | - | DvMF_1153 | 0.54 | -1.0 | |
1,415,358 | + | DvMF_1153 | 0.56 | +0.2 | |
1,415,391 | - | DvMF_1153 | 0.58 | -0.6 | |
1,415,420 | - | DvMF_1153 | 0.61 | -0.5 | |
1,415,484 | - | DvMF_1153 | 0.66 | -0.4 | |
1,415,633 | + | DvMF_1153 | 0.77 | -0.5 | |
1,415,839 | + | -1.0 | |||
1,415,847 | - | -3.7 | |||
1,415,910 | - | -2.9 | |||
1,416,053 | + | -1.1 | |||
1,416,162 | - | DvMF_1154 | 0.12 | -1.5 | |
1,416,591 | + | -2.2 | |||
1,416,596 | + | -1.7 | |||
1,416,604 | - | -0.4 | |||
1,416,647 | + | -1.2 | |||
1,416,890 | + | DvMF_1155 | 0.18 | -0.2 | |
1,416,990 | - | DvMF_1155 | 0.30 | -2.2 | |
1,417,042 | - | DvMF_1155 | 0.37 | +0.2 | |
1,417,066 | + | DvMF_1155 | 0.40 | -1.9 | |
1,417,069 | - | DvMF_1155 | 0.40 | +0.4 | |
1,417,210 | - | DvMF_1155 | 0.58 | -2.1 | |
1,417,220 | - | DvMF_1155 | 0.59 | -0.4 | |
1,417,241 | - | DvMF_1155 | 0.62 | +0.9 | |
1,417,259 | + | DvMF_1155 | 0.64 | -0.5 | |
1,417,487 | + | -1.0 | |||
1,417,490 | - | -0.0 |
Or see this region's nucleotide sequence