Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1152 and DvMF_1153 are separated by 220 nucleotides DvMF_1153 and DvMF_1154 are separated by 168 nucleotides DvMF_1154 and DvMF_1155 are separated by 135 nucleotides
DvMF_1152: DvMF_1152 - Domain of unkown function DUF1786 putative pyruvate format-lyase activating enzyme (RefSeq), at 1,413,260 to 1,414,408
_1152
DvMF_1153: DvMF_1153 - Phenylacetate--CoA ligase (RefSeq), at 1,414,629 to 1,415,933
_1153
DvMF_1154: DvMF_1154 - protein of unknown function DUF456 (RefSeq), at 1,416,102 to 1,416,611
_1154
DvMF_1155: DvMF_1155 - RNA methyltransferase, TrmH family, group 1 (RefSeq), at 1,416,747 to 1,417,547
_1155
Position (kb)
1414
1415
1416 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1413.799 kb on + strand, within DvMF_1152 at 1413.901 kb on + strand, within DvMF_1152 at 1414.027 kb on + strand, within DvMF_1152 at 1414.096 kb on - strand, within DvMF_1152 at 1414.108 kb on + strand, within DvMF_1152 at 1414.249 kb on - strand, within DvMF_1152 at 1414.705 kb on + strand at 1414.875 kb on - strand, within DvMF_1153 at 1414.935 kb on - strand, within DvMF_1153 at 1415.160 kb on - strand, within DvMF_1153 at 1415.264 kb on - strand, within DvMF_1153 at 1415.293 kb on + strand, within DvMF_1153 at 1415.331 kb on - strand, within DvMF_1153 at 1415.358 kb on + strand, within DvMF_1153 at 1415.391 kb on - strand, within DvMF_1153 at 1415.420 kb on - strand, within DvMF_1153 at 1415.484 kb on - strand, within DvMF_1153 at 1415.633 kb on + strand, within DvMF_1153 at 1415.839 kb on + strand at 1415.847 kb on - strand at 1415.910 kb on - strand at 1416.053 kb on + strand at 1416.162 kb on - strand, within DvMF_1154 at 1416.591 kb on + strand at 1416.596 kb on + strand at 1416.604 kb on - strand at 1416.647 kb on + strand at 1416.890 kb on + strand, within DvMF_1155
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Doxycycline hyclate 0.0156 mg/ml remove 1,413,799 + DvMF_1152 0.47 -1.2 1,413,901 + DvMF_1152 0.56 -0.8 1,414,027 + DvMF_1152 0.67 -1.3 1,414,096 - DvMF_1152 0.73 -1.4 1,414,108 + DvMF_1152 0.74 -0.8 1,414,249 - DvMF_1152 0.86 -4.0 1,414,705 + -0.5 1,414,875 - DvMF_1153 0.19 -1.0 1,414,935 - DvMF_1153 0.23 -2.8 1,415,160 - DvMF_1153 0.41 -0.2 1,415,264 - DvMF_1153 0.49 -0.4 1,415,293 + DvMF_1153 0.51 -0.6 1,415,331 - DvMF_1153 0.54 -1.0 1,415,358 + DvMF_1153 0.56 +0.2 1,415,391 - DvMF_1153 0.58 -0.6 1,415,420 - DvMF_1153 0.61 -0.5 1,415,484 - DvMF_1153 0.66 -0.4 1,415,633 + DvMF_1153 0.77 -0.5 1,415,839 + -1.0 1,415,847 - -3.7 1,415,910 - -2.9 1,416,053 + -1.1 1,416,162 - DvMF_1154 0.12 -1.5 1,416,591 + -2.2 1,416,596 + -1.7 1,416,604 - -0.4 1,416,647 + -1.2 1,416,890 + DvMF_1155 0.18 -0.2
Or see this region's nucleotide sequence