Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0923
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,114,706 | + | DvMF_0922 | 0.46 | +0.7 | |
1,114,791 | - | DvMF_0922 | 0.51 | -2.2 | |
1,115,085 | + | DvMF_0922 | 0.67 | -1.5 | |
1,115,315 | - | DvMF_0922 | 0.80 | -0.8 | |
1,115,393 | + | DvMF_0922 | 0.85 | -2.1 | |
1,115,489 | + | +0.6 | |||
1,115,653 | + | -4.4 | |||
1,115,772 | + | -0.2 | |||
1,116,266 | + | DvMF_0923 | 0.36 | -0.9 | |
1,116,351 | - | DvMF_0923 | 0.41 | +0.5 | |
1,116,360 | + | DvMF_0923 | 0.42 | -0.2 | |
1,116,908 | - | DvMF_0923 | 0.75 | -0.0 | |
1,116,934 | + | DvMF_0923 | 0.76 | -0.9 | |
1,117,138 | + | DvMF_0923 | 0.89 | -5.5 | |
1,117,216 | + | -0.6 | |||
1,117,441 | + | -1.4 | |||
1,117,560 | + | -3.6 | |||
1,117,594 | + | -0.5 | |||
1,117,602 | - | +1.6 | |||
1,117,759 | - | DvMF_0924 | 0.19 | +0.1 | |
1,117,860 | - | DvMF_0924 | 0.25 | -0.7 | |
1,117,968 | + | DvMF_0924 | 0.32 | +0.0 | |
1,118,131 | - | DvMF_0924 | 0.42 | +0.1 |
Or see this region's nucleotide sequence