Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0437 and DvMF_0438 are separated by 112 nucleotides DvMF_0438 and DvMF_0439 are separated by 0 nucleotides DvMF_0439 and DvMF_0440 overlap by 4 nucleotides DvMF_0440 and DvMF_0441 are separated by 222 nucleotides
DvMF_0437: DvMF_0437 - magnesium-translocating P-type ATPase (RefSeq), at 511,693 to 514,335
_0437
DvMF_0438: DvMF_0438 - hypothetical protein (RefSeq), at 514,448 to 514,726
_0438
DvMF_0439: DvMF_0439 - phosphoglyceromutase (RefSeq), at 514,727 to 516,400
_0439
DvMF_0440: DvMF_0440 - iojap-like protein (RefSeq), at 516,397 to 516,984
_0440
DvMF_0441: DvMF_0441 - nitroreductase (RefSeq), at 517,207 to 517,860
_0441
Position (kb) 514
515
516
517 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 513.799 kb on - strand, within DvMF_0437 at 513.854 kb on - strand, within DvMF_0437 at 513.937 kb on + strand, within DvMF_0437 at 513.968 kb on + strand, within DvMF_0437 at 513.971 kb on - strand, within DvMF_0437 at 514.042 kb on - strand, within DvMF_0437 at 514.253 kb on - strand at 514.647 kb on - strand, within DvMF_0438 at 516.590 kb on + strand, within DvMF_0440 at 516.800 kb on + strand, within DvMF_0440 at 516.877 kb on + strand, within DvMF_0440 at 516.885 kb on - strand, within DvMF_0440 at 516.997 kb on + strand at 516.998 kb on - strand at 517.019 kb on + strand at 517.027 kb on - strand at 517.204 kb on + strand at 517.212 kb on - strand at 517.384 kb on + strand, within DvMF_0441
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Doxycycline hyclate 0.0156 mg/ml remove 513,799 - DvMF_0437 0.80 -1.5 513,854 - DvMF_0437 0.82 -0.6 513,937 + DvMF_0437 0.85 -0.4 513,968 + DvMF_0437 0.86 +0.0 513,971 - DvMF_0437 0.86 -0.1 514,042 - DvMF_0437 0.89 -2.4 514,253 - -0.7 514,647 - DvMF_0438 0.71 -0.5 516,590 + DvMF_0440 0.33 -0.4 516,800 + DvMF_0440 0.69 +1.5 516,877 + DvMF_0440 0.82 +1.5 516,885 - DvMF_0440 0.83 +0.7 516,997 + -0.4 516,998 - -1.7 517,019 + -0.6 517,027 - -0.8 517,204 + -3.1 517,212 - -1.1 517,384 + DvMF_0441 0.27 -4.2
Or see this region's nucleotide sequence