Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0271
Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.0156 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 308,609 | - | DvMF_0270 | 0.46 | -1.8 | |
| 308,701 | - | DvMF_0270 | 0.52 | -0.9 | |
| 309,124 | - | DvMF_0270 | 0.77 | -0.7 | |
| 309,125 | - | DvMF_0270 | 0.77 | -0.2 | |
| 309,131 | + | DvMF_0270 | 0.77 | -0.3 | |
| 309,176 | + | DvMF_0270 | 0.80 | -1.4 | |
| 309,176 | + | DvMF_0270 | 0.80 | +0.1 | |
| 309,287 | + | DvMF_0270 | 0.86 | +0.9 | |
| 309,305 | - | DvMF_0270 | 0.87 | +0.4 | |
| 309,353 | + | +0.9 | |||
| 309,428 | + | +0.1 | |||
| 309,497 | - | -1.5 | |||
| 309,528 | + | -0.8 | |||
| 309,561 | + | +1.7 | |||
| 309,600 | - | -1.9 | |||
| 309,643 | - | -1.4 | |||
| 309,643 | - | -1.0 | |||
| 309,643 | - | -0.2 | |||
| 309,916 | + | DvMF_0271 | 0.35 | -3.6 | |
| 310,489 | + | -0.4 | |||
| 310,561 | - | -1.0 | |||
| 310,599 | - | +0.0 | |||
| 310,635 | + | -0.6 | |||
| 311,455 | - | DvMF_0272 | 0.70 | -4.1 | |
| 311,486 | + | DvMF_0272 | 0.77 | -2.5 |
Or see this region's nucleotide sequence