Experiment: MoYLS4 with Doxycycline hyclate 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0142 and DvMF_0143 are separated by 402 nucleotides DvMF_0143 and DvMF_0144 are separated by 72 nucleotides DvMF_0144 and DvMF_0145 are separated by 125 nucleotides
DvMF_0142: DvMF_0142 - anaerobic cobalt chelatase (RefSeq), at 158,638 to 159,510
_0142
DvMF_0143: DvMF_0143 - putative lipoprotein (RefSeq), at 159,913 to 160,863
_0143
DvMF_0144: DvMF_0144 - twin-arginine translocation protein, TatA/E family subunit (RefSeq), at 160,936 to 161,139
_0144
DvMF_0145: DvMF_0145 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq), at 161,265 to 163,133
_0145
Position (kb)
159
160
161 Strain fitness (log2 ratio)
-1
0
1 at 159.491 kb on + strand at 160.028 kb on - strand, within DvMF_0143 at 160.146 kb on - strand, within DvMF_0143 at 160.146 kb on - strand, within DvMF_0143 at 160.227 kb on + strand, within DvMF_0143 at 160.463 kb on + strand, within DvMF_0143 at 160.494 kb on - strand, within DvMF_0143 at 160.558 kb on + strand, within DvMF_0143 at 160.599 kb on + strand, within DvMF_0143 at 161.231 kb on - strand at 161.633 kb on - strand, within DvMF_0145 at 161.709 kb on + strand, within DvMF_0145
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Doxycycline hyclate 0.0156 mg/ml remove 159,491 + -0.4 160,028 - DvMF_0143 0.12 -0.7 160,146 - DvMF_0143 0.25 -1.3 160,146 - DvMF_0143 0.25 -0.8 160,227 + DvMF_0143 0.33 -0.7 160,463 + DvMF_0143 0.58 -0.6 160,494 - DvMF_0143 0.61 -1.3 160,558 + DvMF_0143 0.68 -1.1 160,599 + DvMF_0143 0.72 -0.7 161,231 - +0.5 161,633 - DvMF_0145 0.20 -0.4 161,709 + DvMF_0145 0.24 +0.2
Or see this region's nucleotide sequence