Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4145 and Dshi_4146 are separated by 21 nucleotides Dshi_4146 and Dshi_4147 are separated by 188 nucleotides
Dshi_4145: Dshi_4145 - glycosyl transferase family 2 (RefSeq), at 77,191 to 78,195
_4145
Dshi_4146: Dshi_4146 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (RefSeq), at 78,217 to 79,641
_4146
Dshi_4147: Dshi_4147 - glycosyl transferase family 2 (RefSeq), at 79,830 to 80,822
_4147
Position (kb)
78
79
80 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 77.309 kb on - strand, within Dshi_4145 at 77.314 kb on - strand, within Dshi_4145 at 77.359 kb on - strand, within Dshi_4145 at 77.373 kb on - strand, within Dshi_4145 at 77.476 kb on + strand, within Dshi_4145 at 77.486 kb on + strand, within Dshi_4145 at 77.502 kb on + strand, within Dshi_4145 at 77.508 kb on - strand, within Dshi_4145 at 77.653 kb on - strand, within Dshi_4145 at 77.690 kb on - strand, within Dshi_4145 at 77.698 kb on + strand, within Dshi_4145 at 77.711 kb on + strand, within Dshi_4145 at 77.712 kb on - strand, within Dshi_4145 at 77.860 kb on - strand, within Dshi_4145 at 77.889 kb on - strand, within Dshi_4145 at 77.891 kb on - strand, within Dshi_4145 at 78.038 kb on + strand at 78.108 kb on + strand at 78.182 kb on + strand at 78.313 kb on - strand at 78.363 kb on - strand, within Dshi_4146 at 78.387 kb on - strand, within Dshi_4146 at 78.550 kb on - strand, within Dshi_4146 at 78.577 kb on - strand, within Dshi_4146 at 78.705 kb on + strand, within Dshi_4146 at 78.907 kb on - strand, within Dshi_4146 at 79.241 kb on + strand, within Dshi_4146 at 79.502 kb on + strand at 79.547 kb on + strand at 79.623 kb on + strand at 79.659 kb on + strand at 79.673 kb on + strand at 79.782 kb on + strand at 79.782 kb on + strand at 79.782 kb on + strand at 79.816 kb on - strand at 79.870 kb on - strand at 79.911 kb on - strand at 80.070 kb on + strand, within Dshi_4147 at 80.108 kb on - strand, within Dshi_4147 at 80.216 kb on - strand, within Dshi_4147 at 80.297 kb on - strand, within Dshi_4147
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 77,309 - Dshi_4145 0.12 -0.6 77,314 - Dshi_4145 0.12 -0.6 77,359 - Dshi_4145 0.17 -0.6 77,373 - Dshi_4145 0.18 +1.0 77,476 + Dshi_4145 0.28 +0.2 77,486 + Dshi_4145 0.29 -1.0 77,502 + Dshi_4145 0.31 -0.2 77,508 - Dshi_4145 0.32 +0.2 77,653 - Dshi_4145 0.46 -0.6 77,690 - Dshi_4145 0.50 +0.2 77,698 + Dshi_4145 0.50 +0.0 77,711 + Dshi_4145 0.52 -1.2 77,712 - Dshi_4145 0.52 -0.8 77,860 - Dshi_4145 0.67 +0.4 77,889 - Dshi_4145 0.69 -0.6 77,891 - Dshi_4145 0.70 -0.3 78,038 + +0.7 78,108 + -2.8 78,182 + -1.2 78,313 - -0.6 78,363 - Dshi_4146 0.10 +2.6 78,387 - Dshi_4146 0.12 -1.5 78,550 - Dshi_4146 0.23 -0.0 78,577 - Dshi_4146 0.25 +0.9 78,705 + Dshi_4146 0.34 +0.4 78,907 - Dshi_4146 0.48 -1.0 79,241 + Dshi_4146 0.72 +1.2 79,502 + +0.2 79,547 + -0.6 79,623 + -0.9 79,659 + -0.4 79,673 + +1.0 79,782 + +1.0 79,782 + -0.2 79,782 + -1.4 79,816 - -0.2 79,870 - +0.8 79,911 - +2.0 80,070 + Dshi_4147 0.24 +1.9 80,108 - Dshi_4147 0.28 +2.9 80,216 - Dshi_4147 0.39 +2.0 80,297 - Dshi_4147 0.47 +2.3
Or see this region's nucleotide sequence