Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1691 and Dshi_1692 are separated by 97 nucleotides Dshi_1692 and Dshi_1693 overlap by 4 nucleotides Dshi_1693 and Dshi_1694 are separated by 61 nucleotides
Dshi_1691: Dshi_1691 - cobalamin (vitamin B12) biosynthesis CbiD protein (RefSeq), at 1,759,483 to 1,760,532
_1691
Dshi_1692: Dshi_1692 - uroporphyrin-III C-methyltransferase (RefSeq), at 1,760,630 to 1,761,475
_1692
Dshi_1693: Dshi_1693 - cobyrinic acid a,c-diamide synthase (RefSeq), at 1,761,472 to 1,762,767
_1693
Dshi_1694: Dshi_1694 - major facilitator superfamily MFS_1 (RefSeq), at 1,762,829 to 1,764,055
_1694
Position (kb) 1761
1762
1763 Strain fitness (log2 ratio) -1
0
1 at 1760.580 kb on - strand at 1760.901 kb on - strand, within Dshi_1692 at 1763.205 kb on - strand, within Dshi_1694 at 1763.302 kb on - strand, within Dshi_1694 at 1763.302 kb on - strand, within Dshi_1694 at 1763.312 kb on - strand, within Dshi_1694 at 1763.333 kb on - strand, within Dshi_1694 at 1763.427 kb on - strand, within Dshi_1694 at 1763.454 kb on - strand, within Dshi_1694 at 1763.684 kb on - strand, within Dshi_1694
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 1,760,580 - -0.0 1,760,901 - Dshi_1692 0.32 +0.2 1,763,205 - Dshi_1694 0.31 +0.6 1,763,302 - Dshi_1694 0.39 +0.6 1,763,302 - Dshi_1694 0.39 +0.7 1,763,312 - Dshi_1694 0.39 -0.1 1,763,333 - Dshi_1694 0.41 +1.3 1,763,427 - Dshi_1694 0.49 +0.8 1,763,454 - Dshi_1694 0.51 +1.5 1,763,684 - Dshi_1694 0.70 +0.5
Or see this region's nucleotide sequence