Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1330

Experiment: m.b. perchlorate 50 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_1329 and Dshi_1330 overlap by 11 nucleotidesDshi_1330 and Dshi_1331 are separated by 20 nucleotidesDshi_1331 and Dshi_1332 overlap by 1 nucleotides Dshi_1329: Dshi_1329 - proton-translocating NADH-quinone oxidoreductase, chain N (RefSeq), at 1,379,641 to 1,381,080 _1329 Dshi_1330: Dshi_1330 - biotin--acetyl-CoA-carboxylase ligase (RefSeq), at 1,381,070 to 1,381,825 _1330 Dshi_1331: Dshi_1331 - putative transcriptional acitvator, Baf family (RefSeq), at 1,381,846 to 1,382,616 _1331 Dshi_1332: Dshi_1332 - beta-lactamase domain protein (RefSeq), at 1,382,616 to 1,384,286 _1332 Position (kb) 1381 1382Strain fitness (log2 ratio) -1 0 1at 1382.643 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM
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1,382,643 - +0.3

Or see this region's nucleotide sequence