Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1300 and Dshi_1301 are separated by 111 nucleotides Dshi_1301 and Dshi_1302 overlap by 4 nucleotides Dshi_1302 and Dshi_1303 overlap by 4 nucleotides
Dshi_1300: Dshi_1300 - Propionyl-CoA carboxylase (RefSeq), at 1,353,609 to 1,355,213
_1300
Dshi_1301: Dshi_1301 - Carbamoyl-phosphate synthase L chain ATP-binding (RefSeq), at 1,355,325 to 1,357,310
_1301
Dshi_1302: Dshi_1302 - Glutathione S-transferase domain (RefSeq), at 1,357,307 to 1,357,975
_1302
Dshi_1303: Dshi_1303 - Hydroxymethylglutaryl-CoA lyase (RefSeq), at 1,357,972 to 1,358,835
_1303
Position (kb)
1355
1356
1357
1358 Strain fitness (log2 ratio)
-1
0
1
2 at 1354.540 kb on - strand, within Dshi_1300 at 1354.551 kb on - strand, within Dshi_1300 at 1354.708 kb on - strand, within Dshi_1300 at 1354.953 kb on - strand, within Dshi_1300 at 1354.964 kb on - strand, within Dshi_1300 at 1355.057 kb on - strand at 1355.096 kb on + strand at 1355.137 kb on - strand at 1355.163 kb on + strand at 1355.312 kb on - strand at 1355.383 kb on + strand at 1355.527 kb on - strand, within Dshi_1301 at 1355.545 kb on + strand, within Dshi_1301 at 1355.646 kb on + strand, within Dshi_1301 at 1355.792 kb on + strand, within Dshi_1301 at 1355.800 kb on - strand, within Dshi_1301 at 1355.971 kb on - strand, within Dshi_1301 at 1355.982 kb on - strand, within Dshi_1301 at 1356.226 kb on - strand, within Dshi_1301 at 1356.226 kb on - strand, within Dshi_1301 at 1356.301 kb on - strand, within Dshi_1301 at 1356.737 kb on + strand, within Dshi_1301 at 1357.076 kb on + strand, within Dshi_1301 at 1357.220 kb on + strand at 1357.244 kb on - strand at 1357.491 kb on - strand, within Dshi_1302 at 1357.528 kb on + strand, within Dshi_1302 at 1357.528 kb on + strand, within Dshi_1302 at 1357.679 kb on + strand, within Dshi_1302 at 1357.689 kb on + strand, within Dshi_1302 at 1357.766 kb on + strand, within Dshi_1302 at 1357.803 kb on - strand, within Dshi_1302 at 1358.158 kb on - strand, within Dshi_1303 at 1358.299 kb on + strand, within Dshi_1303
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 1,354,540 - Dshi_1300 0.58 -0.3 1,354,551 - Dshi_1300 0.59 +0.1 1,354,708 - Dshi_1300 0.68 +0.9 1,354,953 - Dshi_1300 0.84 +0.9 1,354,964 - Dshi_1300 0.84 -1.2 1,355,057 - -0.2 1,355,096 + -1.0 1,355,137 - -1.1 1,355,163 + -1.2 1,355,312 - -0.7 1,355,383 + -0.7 1,355,527 - Dshi_1301 0.10 +0.6 1,355,545 + Dshi_1301 0.11 +0.3 1,355,646 + Dshi_1301 0.16 -0.2 1,355,792 + Dshi_1301 0.24 +0.2 1,355,800 - Dshi_1301 0.24 +0.4 1,355,971 - Dshi_1301 0.33 +0.5 1,355,982 - Dshi_1301 0.33 -1.1 1,356,226 - Dshi_1301 0.45 -0.9 1,356,226 - Dshi_1301 0.45 -0.1 1,356,301 - Dshi_1301 0.49 +0.8 1,356,737 + Dshi_1301 0.71 +1.6 1,357,076 + Dshi_1301 0.88 -0.0 1,357,220 + +1.3 1,357,244 - -0.6 1,357,491 - Dshi_1302 0.28 +0.7 1,357,528 + Dshi_1302 0.33 +0.5 1,357,528 + Dshi_1302 0.33 +0.6 1,357,679 + Dshi_1302 0.56 +0.2 1,357,689 + Dshi_1302 0.57 +2.1 1,357,766 + Dshi_1302 0.69 +0.1 1,357,803 - Dshi_1302 0.74 -1.0 1,358,158 - Dshi_1303 0.22 +1.7 1,358,299 + Dshi_1303 0.38 +0.8
Or see this region's nucleotide sequence