Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1147 and Dshi_1148 overlap by 1 nucleotides Dshi_1148 and Dshi_1149 are separated by 145 nucleotides Dshi_1149 and Dshi_1150 are separated by 152 nucleotides
Dshi_1147: Dshi_1147 - processing peptidase (RefSeq), at 1,173,801 to 1,175,081
_1147
Dshi_1148: Dshi_1148 - GCN5-related N-acetyltransferase (RefSeq), at 1,175,081 to 1,175,665
_1148
Dshi_1149: Dshi_1149 - translation initiation factor IF-3 (RefSeq), at 1,175,811 to 1,176,419
_1149
Dshi_1150: Dshi_1150 - Ferredoxin--NADP(+) reductase (RefSeq), at 1,176,572 to 1,177,432
_1150
Position (kb)
1175
1176 Strain fitness (log2 ratio)
-1
0
1
2 at 1174.241 kb on - strand, within Dshi_1147 at 1174.460 kb on + strand, within Dshi_1147 at 1174.579 kb on - strand, within Dshi_1147 at 1174.586 kb on + strand, within Dshi_1147 at 1174.586 kb on + strand, within Dshi_1147 at 1174.586 kb on + strand, within Dshi_1147 at 1174.586 kb on + strand, within Dshi_1147 at 1174.594 kb on - strand, within Dshi_1147 at 1174.751 kb on + strand, within Dshi_1147 at 1174.889 kb on - strand, within Dshi_1147 at 1176.445 kb on - strand at 1176.466 kb on - strand at 1176.525 kb on + strand at 1176.533 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 1,174,241 - Dshi_1147 0.34 +1.7 1,174,460 + Dshi_1147 0.51 +2.6 1,174,579 - Dshi_1147 0.61 +1.7 1,174,586 + Dshi_1147 0.61 +0.8 1,174,586 + Dshi_1147 0.61 +1.7 1,174,586 + Dshi_1147 0.61 +1.5 1,174,586 + Dshi_1147 0.61 +1.5 1,174,594 - Dshi_1147 0.62 +2.0 1,174,751 + Dshi_1147 0.74 +1.4 1,174,889 - Dshi_1147 0.85 +2.3 1,176,445 - +0.3 1,176,466 - +0.3 1,176,525 + +1.0 1,176,533 - -0.3
Or see this region's nucleotide sequence