Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0725 and Dshi_0726 overlap by 29 nucleotides Dshi_0726 and Dshi_0727 are separated by 178 nucleotides
Dshi_0725: Dshi_0725 - hypothetical protein (RefSeq), at 732,437 to 733,432
_0725
Dshi_0726: Dshi_0726 - methylmalonyl-CoA mutase, large subunit (RefSeq), at 733,404 to 735,542
_0726
Dshi_0727: Dshi_0727 - transcriptional regulator, LysR family (RefSeq), at 735,721 to 736,650
_0727
Position (kb) 733
734
735
736 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 732.432 kb on - strand at 732.440 kb on - strand at 732.451 kb on + strand at 732.459 kb on - strand at 732.459 kb on - strand at 732.459 kb on - strand at 732.459 kb on - strand at 732.459 kb on - strand at 732.570 kb on + strand, within Dshi_0725 at 732.622 kb on - strand, within Dshi_0725 at 732.688 kb on + strand, within Dshi_0725 at 732.738 kb on + strand, within Dshi_0725 at 732.788 kb on + strand, within Dshi_0725 at 732.814 kb on + strand, within Dshi_0725 at 732.892 kb on - strand, within Dshi_0725 at 732.930 kb on + strand, within Dshi_0725 at 733.091 kb on + strand, within Dshi_0725 at 733.260 kb on + strand, within Dshi_0725 at 733.364 kb on - strand at 733.383 kb on - strand at 733.403 kb on - strand at 735.641 kb on - strand at 735.707 kb on + strand at 735.739 kb on - strand at 735.799 kb on + strand at 735.862 kb on - strand, within Dshi_0727 at 735.884 kb on - strand at 735.988 kb on - strand, within Dshi_0727 at 736.000 kb on - strand, within Dshi_0727 at 736.043 kb on - strand, within Dshi_0727 at 736.115 kb on + strand, within Dshi_0727 at 736.192 kb on - strand, within Dshi_0727 at 736.493 kb on + strand, within Dshi_0727 at 736.493 kb on + strand, within Dshi_0727 at 736.501 kb on - strand, within Dshi_0727 at 736.501 kb on - strand, within Dshi_0727 at 736.529 kb on + strand, within Dshi_0727
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 732,432 - +0.2 732,440 - +0.9 732,451 + +0.5 732,459 - +0.2 732,459 - -0.4 732,459 - -0.5 732,459 - +0.9 732,459 - +2.3 732,570 + Dshi_0725 0.13 +1.0 732,622 - Dshi_0725 0.19 +2.9 732,688 + Dshi_0725 0.25 +1.9 732,738 + Dshi_0725 0.30 +1.7 732,788 + Dshi_0725 0.35 +1.0 732,814 + Dshi_0725 0.38 +2.6 732,892 - Dshi_0725 0.46 -0.3 732,930 + Dshi_0725 0.49 +0.3 733,091 + Dshi_0725 0.66 -0.9 733,260 + Dshi_0725 0.83 +0.4 733,364 - +0.1 733,383 - +1.6 733,403 - +0.3 735,641 - +1.2 735,707 + -2.1 735,739 - -0.8 735,799 + -0.6 735,862 - Dshi_0727 0.15 +1.1 735,884 - -1.0 735,988 - Dshi_0727 0.29 -0.4 736,000 - Dshi_0727 0.30 +0.3 736,043 - Dshi_0727 0.35 -0.4 736,115 + Dshi_0727 0.42 -0.1 736,192 - Dshi_0727 0.51 +0.8 736,493 + Dshi_0727 0.83 -0.4 736,493 + Dshi_0727 0.83 +0.7 736,501 - Dshi_0727 0.84 +0.3 736,501 - Dshi_0727 0.84 -0.6 736,529 + Dshi_0727 0.87 -0.2
Or see this region's nucleotide sequence