Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4345
Experiment: BHIS with Dimethyl Sulfoxide 9 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | BHIS with Dimethyl Sulfoxide 9 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 5,726,256 | - | BT4344 | 0.83 | +0.0 | |
| 5,726,614 | + | -3.1 | |||
| 5,726,672 | + | +0.5 | |||
| 5,726,672 | + | -1.8 | |||
| 5,726,675 | - | -0.2 | |||
| 5,726,728 | + | -0.2 | |||
| 5,726,780 | - | +0.5 | |||
| 5,726,780 | - | +1.5 | |||
| 5,727,007 | + | -0.1 | |||
| 5,727,090 | - | +2.1 | |||
| 5,729,311 | - | BT4346 | 0.19 | -0.5 | |
| 5,729,397 | + | BT4346 | 0.28 | -0.1 | |
| 5,729,611 | - | BT4346 | 0.50 | +1.5 | |
| 5,729,623 | - | BT4346 | 0.52 | -0.1 | |
| 5,729,642 | + | BT4346 | 0.54 | -0.8 | |
| 5,729,957 | - | BT4346 | 0.87 | -2.5 | |
| 5,729,972 | + | BT4346 | 0.88 | -2.4 |
Or see this region's nucleotide sequence