Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3735

Experiment: BHIS with Dimethyl Sulfoxide 9 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 9 vol%
4,845,058	+		BT3734	0.29	+1.1
4,845,093	+		BT3734	0.31	+1.3
4,845,115	+		BT3734	0.33	+1.9
4,845,135	+		BT3734	0.35	+1.4
4,845,136	-		BT3734	0.35	-1.4
4,845,136	-		BT3734	0.35	-1.4
4,845,203	+		BT3734	0.40	+2.4
4,845,207	-		BT3734	0.41	-2.3
4,845,232	+		BT3734	0.43	-1.9
4,845,262	-		BT3734	0.45	+0.3
4,845,262	-		BT3734	0.45	-1.9
4,845,273	-		BT3734	0.46	+1.0
4,845,273	-		BT3734	0.46	-1.2
4,845,289	-		BT3734	0.47	-0.7
4,845,334	+		BT3734	0.51	+0.7
4,845,364	-		BT3734	0.54	+0.4
4,845,364	-		BT3734	0.54	-0.9
4,845,365	+		BT3734	0.54	-2.4
4,845,366	-		BT3734	0.54	-1.0
4,845,369	-		BT3734	0.54	+0.5
4,845,371	-		BT3734	0.54	-0.7
4,845,402	-		BT3734	0.57	-2.1
4,845,402	-		BT3734	0.57	-2.5
4,845,555	+		BT3734	0.69	+0.6
4,845,555	+		BT3734	0.69	-1.5
4,845,556	-		BT3734	0.69	-3.2
4,845,562	-		BT3734	0.70	+1.0
4,845,565	+		BT3734	0.70	-3.0
4,845,565	+		BT3734	0.70	-2.6
4,845,565	+		BT3734	0.70	+0.3
4,845,565	+		BT3734	0.70	-1.6
4,845,566	-		BT3734	0.70	-0.9
4,845,587	+		BT3734	0.72	+0.1
4,845,738	-		BT3734	0.84	+2.0
4,845,738	-		BT3734	0.84	-0.4
4,845,770	+		BT3734	0.87	-3.3
4,845,783	-		BT3734	0.88	-1.9
4,845,811	-				+0.1
4,845,834	-				-2.1
4,845,836	+				+1.6
4,845,837	-				-0.5
4,845,854	+				-0.1
4,845,854	+				+0.4
4,845,877	+				+0.4
4,845,877	+				+0.4
4,845,877	+				+0.2
4,845,878	-				-1.4
4,845,944	+				+0.9
4,845,955	-				-0.1
4,846,038	+		BT3735	0.14	+0.3
4,846,041	-		BT3735	0.15	-0.6
4,846,068	-		BT3735	0.26	+1.4
4,846,156	+		BT3735	0.60	-0.2
4,846,175	-		BT3735	0.67	-3.3
4,846,179	-		BT3735	0.69	-1.2
4,846,179	-		BT3735	0.69	+2.1
4,846,207	+		BT3735	0.79	+1.1
4,846,241	+				+1.9
4,846,263	-				+1.6
4,846,276	+				-2.5
4,846,277	-				-1.8
4,846,282	-				-1.7
4,846,284	+				+0.8
4,846,285	-				+0.6
4,846,288	-				-0.2
4,846,292	-				-0.7
4,846,296	-				+1.0
4,846,306	+				+1.5
4,846,307	-				+0.6
4,846,308	+				-1.4
4,846,318	+				-1.8
4,846,325	-				-1.6
4,846,413	+		BT3736	0.29	-1.2
4,846,481	-		BT3736	0.52	-0.2
4,846,579	+		BT3736	0.86	-1.7
4,846,582	-		BT3736	0.87	+0.1
4,846,582	-		BT3736	0.87	-3.4
4,846,588	-		BT3736	0.89	+0.9
4,846,658	+				+0.6
4,846,686	+				-1.9
4,846,853	+				-3.2
4,846,866	-				-0.6
4,846,895	+				-0.0
4,846,904	+				+1.6
4,846,907	+				-1.4
4,846,908	-				+0.8
4,846,939	+				+1.2
4,846,940	-				+0.1
4,847,085	+		BT3737	0.56	-1.2
4,847,173	+		BT3737	0.86	-0.2
4,847,173	+		BT3737	0.86	-1.4
4,847,174	-		BT3737	0.86	-3.0
4,847,191	+				+0.6
4,847,218	+				+0.3