Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3568

Experiment: BHIS with Dimethyl Sulfoxide 9 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 9 vol%
4,618,117	-		BT3567	0.63	-2.0
4,618,160	+		BT3567	0.65	-0.4
4,618,161	-		BT3567	0.65	+0.3
4,618,226	+		BT3567	0.68	+1.6
4,618,227	-		BT3567	0.68	+0.5
4,618,235	+		BT3567	0.68	-1.7
4,618,270	+		BT3567	0.70	-1.0
4,618,270	+		BT3567	0.70	-2.6
4,618,273	-		BT3567	0.70	-1.2
4,618,273	-		BT3567	0.70	+0.9
4,618,304	+		BT3567	0.71	-2.7
4,618,305	-		BT3567	0.71	+0.0
4,618,359	-		BT3567	0.73	-0.7
4,618,574	+		BT3567	0.83	-2.0
4,618,688	+		BT3567	0.88	-0.4
4,618,972	-				+0.5
4,618,976	-				-0.5
4,619,003	+				+0.4
4,619,030	+				-1.4
4,619,096	+				-0.6
4,619,097	-				-1.6
4,619,248	+		BT3568	0.16	-1.1
4,619,249	-		BT3568	0.16	-0.5
4,619,249	-		BT3568	0.16	-1.6
4,619,255	-		BT3568	0.16	-2.1
4,619,293	-		BT3568	0.19	-1.2
4,619,352	-		BT3568	0.23	-0.4
4,619,449	-		BT3568	0.29	-0.2
4,619,621	+		BT3568	0.40	-0.7
4,619,727	-		BT3568	0.47	-2.3
4,619,728	+		BT3568	0.47	-1.7
4,619,772	+		BT3568	0.50	+0.4
4,619,791	-		BT3568	0.51	-1.4
4,619,791	-		BT3568	0.51	-1.3
4,619,792	+		BT3568	0.51	-0.7
4,619,806	+		BT3568	0.52	+0.6
4,619,826	+		BT3568	0.54	+0.7
4,619,826	+				-0.7
4,619,854	+		BT3568	0.55	-1.6
4,619,855	-		BT3568	0.55	-0.5
4,619,856	+		BT3568	0.56	+1.6
4,619,857	-		BT3568	0.56	-0.3
4,619,908	-		BT3568	0.59	-0.3
4,619,980	+		BT3568	0.64	+0.4
4,620,044	+		BT3568	0.68	-2.3
4,620,082	-		BT3568	0.70	+0.6
4,620,119	-		BT3568	0.73	+0.0
4,620,172	+		BT3568	0.76	+0.8
4,620,178	+		BT3568	0.77	-1.6
4,620,179	-		BT3568	0.77	-0.4
4,620,179	-		BT3568	0.77	+0.4
4,620,179	-		BT3568	0.77	-0.2
4,620,179	-		BT3568	0.77	-1.3
4,620,187	-		BT3568	0.77	+0.0
4,620,199	-		BT3568	0.78	+0.3
4,620,245	+		BT3568	0.81	-0.2
4,620,246	-		BT3568	0.81	-0.3
4,620,292	+		BT3568	0.84	-2.3
4,620,292	+		BT3568	0.84	-5.0
4,620,332	-		BT3568	0.87	-0.7
4,620,381	+		BT3568	0.90	-1.0
4,620,382	-		BT3568	0.90	-3.9
4,620,480	-				-0.3
4,620,503	-				+0.0
4,620,503	-				+0.4
4,620,523	+				-1.6
4,620,524	-				-2.0
4,620,624	+				-1.6
4,620,640	+				-2.5
4,620,720	-				-3.1
4,620,740	-				+0.6
4,620,774	+				+1.1
4,620,774	+				+0.4
4,620,775	-				+1.0
4,620,860	+				+1.6
4,620,886	+				+0.7
4,620,886	+				-2.0
4,620,911	+				-1.3
4,620,912	-				+2.3
4,620,912	-				+0.6
4,620,989	-		BT3569	0.11	+0.5
4,621,010	-		BT3569	0.12	-3.6
4,621,105	+		BT3569	0.15	+1.2
4,621,105	+		BT3569	0.15	+0.8
4,621,132	-		BT3569	0.16	-3.7
4,621,217	+		BT3569	0.19	-0.4
4,621,255	+		BT3569	0.20	+1.6
4,621,273	+		BT3569	0.21	-1.0
4,621,312	+		BT3569	0.22	-3.3
4,621,409	-		BT3569	0.25	-0.9