Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3539

Experiment: BHIS with Dimethyl Sulfoxide 9 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 9 vol%
4,575,630	+		BT3537	0.69	+1.6
4,575,631	-		BT3537	0.69	+1.6
4,575,631	-		BT3537	0.69	+0.7
4,575,648	-		BT3537	0.76	-1.6
4,575,653	+		BT3537	0.78	-0.3
4,575,661	+		BT3537	0.81	-1.0
4,575,661	+		BT3537	0.81	-1.1
4,575,662	-		BT3537	0.82	+0.3
4,575,662	-		BT3537	0.82	-1.2
4,575,683	+				+0.1
4,575,684	-				-0.7
4,575,685	+				+1.6
4,575,686	-				-2.3
4,575,708	-				+0.6
4,575,720	+				-2.0
4,575,764	+				-2.6
4,575,765	-				-2.0
4,575,765	-				+1.6
4,575,814	+				+0.1
4,575,822	+				-1.4
4,575,828	+				-2.0
4,575,829	-				-0.8
4,575,829	-				-0.4
4,575,844	+				+0.6
4,575,845	-				-2.1
4,575,886	-				-4.3
4,575,886	-				-1.6
4,575,886	-				-1.7
4,575,899	+		BT3538	0.11	+0.7
4,575,930	-		BT3538	0.15	-1.3
4,575,956	+		BT3538	0.18	-1.4
4,575,996	+		BT3538	0.23	+0.9
4,576,095	-		BT3538	0.35	+1.0
4,576,137	+		BT3538	0.40	+0.5
4,576,137	+		BT3538	0.40	-1.4
4,576,141	-		BT3538	0.41	+0.5
4,576,141	-		BT3538	0.41	-0.2
4,576,155	+		BT3538	0.43	+0.2
4,576,194	+		BT3538	0.47	-1.0
4,576,195	-		BT3538	0.47	+0.5
4,576,195	-		BT3538	0.47	-3.7
4,576,198	+		BT3538	0.48	-2.0
4,576,208	-		BT3538	0.49	+0.3
4,576,208	-		BT3538	0.49	-0.5
4,576,315	-		BT3538	0.62	-0.8
4,576,345	+		BT3538	0.66	+0.6
4,576,345	+		BT3538	0.66	-2.5
4,576,346	-		BT3538	0.66	-0.1
4,576,347	+		BT3538	0.66	-1.1
4,576,348	-		BT3538	0.66	-1.4
4,576,348	-		BT3538	0.66	+1.1
4,576,459	+		BT3538	0.80	+1.0
4,576,572	+				-0.3
4,576,573	-				+1.6
4,576,573	-				-2.0
4,576,620	-				-1.5
4,576,643	-				-1.6
4,576,671	+		BT3539	0.18	-3.0
4,576,671	+		BT3539	0.18	-0.1
4,576,687	-		BT3539	0.24	-1.4
4,576,687	-		BT3539	0.24	-0.6
4,576,687	-		BT3539	0.24	+0.0
4,576,692	-		BT3539	0.26	-1.1
4,576,694	+		BT3539	0.26	-3.4
4,576,694	+		BT3539	0.26	-2.3
4,576,695	-		BT3539	0.27	-0.7
4,576,710	+		BT3539	0.32	-2.5
4,576,754	-		BT3539	0.47	+0.6
4,576,819	-		BT3539	0.70	-0.2
4,576,828	-		BT3539	0.73	-3.5
4,576,858	-		BT3539	0.83	-0.3
4,576,878	-				+1.7
4,576,888	-				-1.3
4,576,889	+				+0.6
4,576,890	-				-2.2
4,576,914	+				+0.4
4,576,960	+				-2.4
4,576,977	+		BT3540	0.11	-2.4
4,577,033	-		BT3540	0.19	+1.6
4,577,051	+		BT3540	0.21	-1.0
4,577,051	+		BT3540	0.21	+0.6
4,577,052	-		BT3540	0.21	+2.0
4,577,084	+		BT3540	0.26	+0.6
4,577,087	+		BT3540	0.26	-4.2
4,577,087	+		BT3540	0.26	-1.3
4,577,088	-		BT3540	0.26	-2.6
4,577,122	-		BT3540	0.31	+0.2
4,577,149	+		BT3540	0.35	-1.6
4,577,152	-		BT3540	0.35	+1.6
4,577,152	-		BT3540	0.35	-0.5
4,577,154	+		BT3540	0.36	+0.9
4,577,155	-		BT3540	0.36	+0.6
4,577,284	+		BT3540	0.54	-0.6
4,577,442	-		BT3540	0.76	-0.1
4,577,471	+		BT3540	0.80	+0.6
4,577,475	-		BT3540	0.81	-1.0
4,577,475	-		BT3540	0.81	-1.3
4,577,478	+		BT3540	0.81	-0.4
4,577,478	+		BT3540	0.81	-2.2
4,577,479	-		BT3540	0.81	-2.2
4,577,528	+		BT3540	0.88	-1.1
4,577,529	-		BT3540	0.89	-2.1
4,577,531	-		BT3540	0.89	+1.0
4,577,531	-		BT3540	0.89	+1.2
4,577,579	-				-2.3
4,577,609	+				-2.3
4,577,631	+				-1.2
4,577,656	+				+1.5
4,577,656	+				+0.3
4,577,670	+				+0.1
4,577,701	+				+0.9
4,577,702	-				-0.7
4,577,747	+				-1.2
4,577,766	+				-2.4
4,577,786	+				-1.4
4,577,786	+				-0.0
4,577,786	+				+0.2
4,577,787	-				+2.1
4,577,791	+				-1.4
4,577,791	+				-4.1
4,577,792	-				+0.2
4,577,796	+				-0.3
4,577,804	+				-1.0
4,577,872	+				-2.6
4,577,882	+				+2.6
4,577,883	-				-0.1
4,577,905	-				-2.8
4,577,905	-				-0.9