Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3095

Experiment: BHIS with Dimethyl Sulfoxide 9 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 9 vol%
3,929,901	+		BT3094	0.21	+0.1
3,929,901	+		BT3094	0.21	-2.4
3,929,902	-		BT3094	0.21	-1.7
3,929,910	-		BT3094	0.22	-4.8
3,929,914	-		BT3094	0.22	-2.7
3,929,914	-		BT3094	0.22	-2.6
3,929,935	+		BT3094	0.24	+0.9
3,929,954	+		BT3094	0.26	-2.0
3,929,954	+		BT3094	0.26	-2.1
3,929,955	-		BT3094	0.26	-0.6
3,929,955	-		BT3094	0.26	+0.1
3,929,955	-		BT3094	0.26	-1.6
3,929,988	+		BT3094	0.29	-1.1
3,929,989	-		BT3094	0.29	-0.8
3,929,996	-		BT3094	0.29	-0.3
3,930,018	-		BT3094	0.31	-1.5
3,930,045	-		BT3094	0.34	+2.1
3,930,083	-		BT3094	0.37	-0.4
3,930,124	+		BT3094	0.41	-0.6
3,930,125	-		BT3094	0.41	-0.6
3,930,128	+		BT3094	0.41	-0.6
3,930,149	+		BT3094	0.43	+0.9
3,930,166	-		BT3094	0.44	+1.1
3,930,207	+		BT3094	0.48	-0.7
3,930,207	+		BT3094	0.48	-0.2
3,930,216	+		BT3094	0.49	+1.7
3,930,233	+		BT3094	0.50	+1.7
3,930,311	-		BT3094	0.57	-2.6
3,930,315	+		BT3094	0.57	-1.3
3,930,316	-		BT3094	0.58	-0.3
3,930,339	+		BT3094	0.60	-1.7
3,930,340	-		BT3094	0.60	+2.4
3,930,340	-		BT3094	0.60	-2.1
3,930,361	+		BT3094	0.62	+1.7
3,930,393	+		BT3094	0.64	+0.7
3,930,394	-		BT3094	0.64	-2.7
3,930,414	-		BT3094	0.66	-1.9
3,930,429	+		BT3094	0.68	-2.0
3,930,430	-		BT3094	0.68	-1.1
3,930,457	-		BT3094	0.70	+1.1
3,930,603	+		BT3094	0.83	+2.9
3,930,603	+		BT3094	0.83	+1.7
3,930,603	+		BT3094	0.83	+0.0
3,930,604	-		BT3094	0.83	+1.7
3,930,605	+		BT3094	0.83	+1.7
3,930,605	+		BT3094	0.83	-3.0
3,930,606	-		BT3094	0.83	-2.7
3,930,653	+		BT3094	0.87	+0.3
3,930,673	+		BT3094	0.89	+2.0
3,930,705	+				-1.3
3,930,706	-				-0.5
3,930,838	-				+1.7
3,930,881	-				+2.7
3,930,899	+				+1.7
3,930,920	+				-1.6
3,930,986	-				+2.7
3,931,061	-		BT3095	0.10	-1.8
3,931,086	+		BT3095	0.12	+0.1
3,931,087	-		BT3095	0.12	-1.1
3,931,089	-		BT3095	0.12	-0.9
3,931,091	-		BT3095	0.12	-1.6
3,931,091	-		BT3095	0.12	-2.4
3,931,107	-		BT3095	0.13	-2.0
3,931,111	-		BT3095	0.14	-1.1
3,931,147	-		BT3095	0.16	-3.4
3,931,234	-		BT3095	0.21	+0.7
3,931,466	-		BT3095	0.36	-1.6
3,931,616	-		BT3095	0.46	-2.1
3,931,627	+		BT3095	0.47	-2.5
3,931,628	-		BT3095	0.47	-1.6
3,931,649	+		BT3095	0.48	-1.0
3,931,649	+		BT3095	0.48	+0.9
3,931,649	+		BT3095	0.48	-0.7
3,931,795	-		BT3095	0.58	-2.6
3,931,799	+		BT3095	0.58	-0.3
3,931,802	+		BT3095	0.58	-1.5
3,931,882	+		BT3095	0.63	-2.4
3,932,040	-		BT3095	0.73	+0.7
3,932,093	-		BT3095	0.77	-0.5
3,932,093	-		BT3095	0.77	+0.1
3,932,107	-		BT3095	0.78	+2.3
3,932,125	+		BT3095	0.79	-3.2
3,932,179	+		BT3095	0.82	-0.3
3,932,179	+		BT3095	0.82	-0.3
3,932,180	-		BT3095	0.82	-0.8
3,932,180	-		BT3095	0.82	+0.1
3,932,180	-		BT3095	0.82	+0.4
3,932,246	-		BT3095	0.87	-2.3
3,932,251	-		BT3095	0.87	-1.5
3,932,251	-		BT3095	0.87	-1.9
3,932,252	+		BT3095	0.87	+1.3
3,932,253	-		BT3095	0.87	-1.1
3,932,253	-		BT3095	0.87	-2.8
3,932,253	-		BT3095	0.87	+0.8
3,932,253	-		BT3095	0.87	-0.1
3,932,284	+		BT3095	0.89	-0.6
3,932,293	+		BT3095	0.90	+0.7
3,932,297	+				-0.3
3,932,298	-				-0.3
3,932,335	+				-0.3
3,932,336	-				+0.1
3,932,368	+				+0.0
3,932,369	-				-2.4
3,932,406	+				-0.2
3,932,406	+				-1.5
3,932,406	+				-1.3
3,932,420	+				+0.4
3,932,462	+				-0.3
3,932,481	+				+0.4
3,932,482	-				+0.7
3,932,520	+				-1.9
3,932,532	+				+0.6
3,932,658	+				-1.3
3,932,698	+		BT3096	0.11	-0.2
3,932,705	+		BT3096	0.11	+1.7
3,932,730	-		BT3096	0.12	+2.4
3,932,821	+		BT3096	0.17	-1.6
3,932,821	+		BT3096	0.17	-2.6
3,932,821	+		BT3096	0.17	-0.5
3,932,864	+		BT3096	0.19	-0.8
3,932,864	+		BT3096	0.19	+0.7
3,932,865	-		BT3096	0.19	+1.1
3,932,945	+		BT3096	0.22	-2.0
3,932,990	-		BT3096	0.25	+1.1
3,932,995	+		BT3096	0.25	-0.4
3,932,996	-		BT3096	0.25	+1.3
3,933,049	+		BT3096	0.27	-1.6
3,933,114	+		BT3096	0.30	-1.4
3,933,186	-		BT3096	0.34	+0.0
3,933,200	-		BT3096	0.34	-2.2
3,933,200	-		BT3096	0.34	-0.6
3,933,201	+		BT3096	0.35	+0.1
3,933,202	-		BT3096	0.35	+1.7
3,933,295	+		BT3096	0.39	-1.8
3,933,300	+		BT3096	0.39	-0.3
3,933,330	+		BT3096	0.41	+0.4
3,933,330	+		BT3096	0.41	-0.2
3,933,331	-		BT3096	0.41	-0.1
3,933,336	+		BT3096	0.41	-1.8
3,933,336	+		BT3096	0.41	+0.8
3,933,337	-		BT3096	0.41	-1.8
3,933,378	+		BT3096	0.43	-2.3
3,933,378	+		BT3096	0.43	-1.3
3,933,401	+		BT3096	0.44	-3.0
3,933,403	+		BT3096	0.44	-0.7
3,933,403	+		BT3096	0.44	-3.3
3,933,404	-		BT3096	0.44	-2.7