Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2358

Experiment: BHIS with Dimethyl Sulfoxide 9 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 9 vol%
2,937,387	+		BT2356	0.59	-0.5
2,937,415	+		BT2356	0.63	+0.2
2,937,458	-		BT2356	0.69	-2.8
2,937,479	+		BT2356	0.72	+1.3
2,937,487	+		BT2356	0.73	-1.8
2,937,487	+		BT2356	0.73	+0.5
2,937,487	+		BT2356	0.73	+1.5
2,937,547	-		BT2356	0.81	-0.0
2,937,558	+		BT2356	0.83	-1.0
2,937,572	+		BT2356	0.85	+1.5
2,937,573	-		BT2356	0.85	-2.0
2,937,639	-				+0.8
2,937,661	+				-1.3
2,937,661	+				-0.1
2,937,673	+				-1.5
2,937,680	+				-0.5
2,937,713	+				-1.1
2,937,714	-				+0.2
2,937,724	-				-2.8
2,937,741	+				-1.0
2,937,741	+				-1.2
2,937,741	+				+0.7
2,937,742	-				+1.2
2,937,745	+				+0.6
2,937,750	-				-3.5
2,937,750	-				-2.2
2,937,824	-		BT2357	0.17	-2.4
2,937,824	-		BT2357	0.17	-3.2
2,937,878	+		BT2357	0.32	+1.9
2,937,879	-		BT2357	0.32	-1.3
2,937,899	-		BT2357	0.38	-0.7
2,937,941	+		BT2357	0.49	+1.3
2,937,945	+		BT2357	0.51	+0.5
2,937,945	+		BT2357	0.51	-2.1
2,937,974	-		BT2357	0.59	+0.2
2,937,974	-		BT2357	0.59	+3.1
2,937,974	-		BT2357	0.59	-1.6
2,938,015	+		BT2357	0.70	-0.0
2,938,025	+		BT2357	0.73	-0.0
2,938,026	-		BT2357	0.73	+0.5
2,938,048	-		BT2357	0.79	-0.5
2,938,048	-		BT2357	0.79	+0.5
2,938,105	+				-1.7
2,938,113	+				-2.6
2,938,204	+				+1.1
2,938,216	-				-1.6
2,938,266	-				+1.8
2,938,266	-				-1.0
2,938,284	+				+1.1
2,938,284	+				-2.8
2,938,287	+				-0.5
2,938,328	-				-1.9
2,938,439	+		BT2358	0.27	-2.7
2,938,461	-		BT2358	0.36	-2.8
2,938,461	-		BT2358	0.36	-1.6
2,938,557	-		BT2358	0.76	-1.6
2,938,632	+				+0.3
2,938,636	+				-0.1
2,938,654	+				-1.8
2,938,660	+				-0.0
2,938,660	+				-2.3
2,938,675	-				-1.5
2,938,680	+				+1.9
2,938,806	+				-1.5
2,938,807	-				+0.8
2,938,854	+				+1.3
2,938,855	-				+0.4
2,938,861	+				-1.9
2,938,862	-				+0.0
2,938,862	-				-1.9
2,938,862	-				+4.1
2,938,865	-				-1.3
2,938,865	-				+0.4
2,938,877	+				+0.3
2,938,877	+				-0.4
2,938,878	-				+0.8
2,938,878	-				-1.5
2,938,888	-				+0.8
2,938,896	+				+0.8
2,938,910	+				-2.3
2,938,911	-				+0.9
2,938,924	+				-2.0
2,938,930	-				-0.8
2,938,951	-				-2.2
2,938,977	+				-2.3
2,939,018	+				-0.6
2,939,066	-				+0.2
2,939,068	+				-2.9
2,939,079	+				+0.5
2,939,179	+				+1.5
2,939,186	-				+0.9
2,939,189	+				-0.0
2,939,190	-				-2.2
2,939,192	-				+0.3
2,939,226	+				+0.2
2,939,232	+				-1.0
2,939,233	-				-1.6
2,939,262	-				-0.0
2,939,271	+				-2.2
2,939,272	-				-1.3
2,939,330	-				+1.5
2,939,383	+				-2.0
2,939,399	+				-2.3
2,939,399	+				+0.0
2,939,400	-				+0.9
2,939,401	+				-2.4
2,939,401	+				-1.6
2,939,402	-				-1.5
2,939,457	-				-0.1
2,939,512	+				+2.0
2,939,513	-				-1.0
2,939,543	+				+0.5
2,939,544	-				+1.2
2,939,551	+				+0.1
2,939,556	+				-1.6
2,939,570	-				-4.1
2,939,570	-				+0.5
2,939,574	-				+1.5
2,939,587	+				-1.9
2,939,606	+				+1.1
2,939,611	+				-2.2