Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2211

Experiment: BHIS with Dimethyl Sulfoxide 9 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 9 vol%
2,777,838	+				-1.3
2,777,858	+				-1.9
2,778,009	+		BT2208	0.76	+0.5
2,778,010	-		BT2208	0.76	-0.5
2,778,026	+		BT2208	0.83	-2.1
2,778,039	-		BT2208	0.89	-2.1
2,778,039	-		BT2208	0.89	-2.2
2,778,065	-				-0.6
2,778,065	-				+0.1
2,778,134	+				+0.7
2,778,223	-		BT2209	0.29	-3.0
2,778,340	-		BT2209	0.68	-1.8
2,778,424	+				-0.7
2,778,425	-				-0.8
2,778,448	+				+1.1
2,778,479	-		BT2210	0.17	+0.7
2,778,502	+		BT2210	0.23	-1.1
2,778,502	+		BT2210	0.23	-2.3
2,778,505	-		BT2210	0.24	-1.1
2,778,595	+		BT2210	0.47	-1.3
2,778,596	-		BT2210	0.48	+0.7
2,778,720	+		BT2210	0.80	-0.6
2,778,726	+		BT2210	0.82	-0.1
2,778,775	+				-0.2
2,778,786	+				-0.3
2,778,821	+				+0.9
2,778,823	+				-2.5
2,778,823	+				-0.3
2,778,839	-				+0.0
2,778,892	+				-0.1
2,778,949	-		BT2211	0.12	-3.4
2,779,096	-		BT2211	0.23	-1.1
2,779,096	-		BT2211	0.23	+0.6
2,779,174	+		BT2211	0.29	-0.5
2,779,188	+		BT2211	0.31	+1.1
2,779,213	+		BT2211	0.32	-2.1
2,779,214	-		BT2211	0.32	-3.2
2,779,328	-		BT2211	0.41	+1.5
2,779,389	-		BT2211	0.46	+0.5
2,779,433	+		BT2211	0.49	+0.7
2,779,433	+		BT2211	0.49	-0.3
2,779,496	+		BT2211	0.54	-2.2
2,779,501	-		BT2211	0.54	-1.5
2,779,547	-		BT2211	0.58	+0.1
2,779,573	+		BT2211	0.60	-0.5
2,779,574	-		BT2211	0.60	-0.2
2,779,623	+		BT2211	0.64	-0.2
2,779,746	+		BT2211	0.73	-2.2
2,779,746	+		BT2211	0.73	-0.1
2,779,813	+		BT2211	0.78	-2.6
2,779,821	-		BT2211	0.79	-0.8
2,779,957	+		BT2211	0.89	-1.1
2,779,958	-		BT2211	0.89	-3.7
2,779,958	-		BT2211	0.89	-0.6
2,779,958	-		BT2211	0.89	-0.2
2,779,959	+		BT2211	0.89	-1.6
2,779,960	-		BT2211	0.89	-0.5
2,779,960	-		BT2211	0.89	-1.6
2,780,048	+				-0.1
2,780,076	+				+0.5
2,780,077	-				+0.5
2,780,379	-		BT2212	0.23	-0.1
2,780,380	+		BT2212	0.23	+0.5
2,780,424	-		BT2212	0.27	-3.0
2,780,436	+		BT2212	0.29	-1.4
2,780,436	+		BT2212	0.29	+2.4
2,780,443	+		BT2212	0.29	-2.1
2,780,524	+		BT2212	0.38	-0.1
2,780,538	+		BT2212	0.39	-0.1
2,780,538	+		BT2212	0.39	-1.3
2,780,582	+		BT2212	0.43	+1.5
2,780,676	+		BT2212	0.53	+1.5
2,780,681	+		BT2212	0.54	+0.7
2,780,682	-		BT2212	0.54	-2.7
2,780,698	-		BT2212	0.55	+0.9
2,780,719	+		BT2212	0.58	+0.4
2,780,720	-		BT2212	0.58	-0.3
2,780,795	-		BT2212	0.65	-2.2
2,780,848	-		BT2212	0.71	-1.2
2,780,987	-		BT2212	0.85	-0.5