Experiment: BHIS with Dimethyl Sulfoxide 9 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt p5482_28 and p5482_29 are separated by 43 nucleotides p5482_29 and p5482_30 are separated by 188 nucleotides p5482_30 and p5482_31 are separated by 4 nucleotides
p5482_27: p5482_27 - hypothetical protein (NCBI), at 22,343 to 23,404
_27
p5482_28: p5482_28 - hypothetical protein (NCBI), at 23,353 to 24,321
_28
p5482_29: p5482_29 - hypothetical protein (NCBI), at 24,365 to 25,486
_29
p5482_30: p5482_30 - hypothetical protein (NCBI), at 25,675 to 25,932
_30
p5482_31: p5482_31 - chromosome-partitioning ATPase (NCBI), at 25,937 to 26,695
_31
Position (kb) 24
25
26 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 23.405 kb on + strand at 23.405 kb on + strand at 23.412 kb on - strand at 23.419 kb on - strand at 23.433 kb on - strand at 23.466 kb on + strand, within p5482_28 at 23.474 kb on + strand, within p5482_28 at 23.475 kb on - strand, within p5482_28 at 23.479 kb on + strand, within p5482_28 at 23.480 kb on - strand, within p5482_28 at 23.480 kb on - strand, within p5482_28 at 23.511 kb on - strand, within p5482_28 at 23.568 kb on - strand, within p5482_28 at 23.568 kb on - strand, within p5482_28 at 23.568 kb on - strand, within p5482_28 at 23.568 kb on - strand, within p5482_28 at 23.573 kb on - strand, within p5482_28 at 23.603 kb on + strand, within p5482_28 at 23.604 kb on - strand, within p5482_28 at 23.604 kb on - strand, within p5482_28 at 23.678 kb on - strand, within p5482_28 at 23.716 kb on + strand, within p5482_28 at 23.717 kb on - strand, within p5482_28 at 23.717 kb on - strand, within p5482_28 at 23.806 kb on - strand, within p5482_28 at 23.806 kb on - strand, within p5482_28 at 23.806 kb on - strand, within p5482_28 at 23.806 kb on - strand, within p5482_28 at 23.806 kb on - strand, within p5482_28 at 23.806 kb on - strand, within p5482_28 at 23.806 kb on - strand, within p5482_28 at 23.807 kb on + strand, within p5482_28 at 23.808 kb on - strand, within p5482_28 at 23.808 kb on - strand, within p5482_28 at 23.852 kb on + strand, within p5482_28 at 23.852 kb on + strand, within p5482_28 at 23.853 kb on - strand, within p5482_28 at 23.856 kb on - strand, within p5482_28 at 23.856 kb on - strand, within p5482_28 at 23.862 kb on - strand, within p5482_28 at 23.862 kb on - strand, within p5482_28 at 23.879 kb on + strand, within p5482_28 at 23.888 kb on - strand, within p5482_28 at 23.888 kb on - strand, within p5482_28 at 23.888 kb on - strand, within p5482_28 at 23.894 kb on - strand, within p5482_28 at 23.894 kb on - strand, within p5482_28 at 23.894 kb on - strand, within p5482_28 at 23.894 kb on - strand, within p5482_28 at 23.894 kb on - strand, within p5482_28 at 23.894 kb on - strand, within p5482_28 at 23.971 kb on - strand, within p5482_28 at 23.971 kb on - strand, within p5482_28 at 24.048 kb on + strand, within p5482_28 at 24.048 kb on + strand, within p5482_28 at 24.049 kb on - strand, within p5482_28 at 24.049 kb on - strand, within p5482_28 at 24.051 kb on - strand, within p5482_28 at 24.051 kb on - strand, within p5482_28 at 24.061 kb on + strand, within p5482_28 at 24.062 kb on - strand, within p5482_28 at 24.063 kb on + strand, within p5482_28 at 24.064 kb on - strand, within p5482_28 at 24.064 kb on - strand, within p5482_28 at 24.113 kb on - strand, within p5482_28 at 24.113 kb on - strand, within p5482_28 at 24.139 kb on + strand, within p5482_28 at 24.143 kb on + strand, within p5482_28 at 24.143 kb on + strand, within p5482_28 at 24.196 kb on - strand, within p5482_28 at 24.229 kb on + strand at 24.229 kb on + strand at 24.230 kb on - strand at 24.230 kb on - strand at 24.236 kb on + strand at 24.311 kb on + strand at 24.312 kb on - strand at 24.312 kb on - strand at 24.312 kb on - strand at 24.312 kb on - strand at 24.312 kb on - strand at 24.376 kb on + strand at 24.381 kb on + strand at 24.381 kb on + strand at 24.382 kb on - strand at 24.382 kb on - strand at 24.405 kb on + strand at 24.405 kb on + strand at 24.405 kb on + strand at 24.408 kb on + strand at 24.409 kb on - strand at 24.409 kb on - strand at 24.476 kb on - strand at 24.483 kb on + strand, within p5482_29 at 24.484 kb on - strand, within p5482_29 at 24.487 kb on + strand, within p5482_29 at 24.487 kb on + strand, within p5482_29 at 24.487 kb on + strand, within p5482_29 at 24.487 kb on + strand, within p5482_29 at 24.488 kb on - strand, within p5482_29 at 24.488 kb on - strand, within p5482_29 at 24.508 kb on + strand, within p5482_29 at 24.514 kb on + strand, within p5482_29 at 24.514 kb on + strand, within p5482_29 at 24.515 kb on - strand, within p5482_29 at 24.517 kb on + strand, within p5482_29 at 24.518 kb on - strand, within p5482_29 at 24.575 kb on - strand, within p5482_29 at 24.575 kb on - strand, within p5482_29 at 24.575 kb on - strand, within p5482_29 at 24.653 kb on + strand, within p5482_29 at 24.653 kb on + strand, within p5482_29 at 24.654 kb on - strand, within p5482_29 at 24.704 kb on + strand, within p5482_29 at 24.728 kb on - strand, within p5482_29 at 24.749 kb on + strand, within p5482_29 at 24.749 kb on + strand, within p5482_29 at 24.750 kb on - strand, within p5482_29 at 24.751 kb on + strand, within p5482_29 at 24.751 kb on + strand, within p5482_29 at 24.783 kb on + strand, within p5482_29 at 24.784 kb on - strand, within p5482_29 at 24.784 kb on - strand, within p5482_29 at 24.788 kb on + strand, within p5482_29 at 24.788 kb on + strand, within p5482_29 at 24.789 kb on - strand, within p5482_29 at 24.789 kb on - strand, within p5482_29 at 24.789 kb on - strand, within p5482_29 at 24.789 kb on - strand, within p5482_29 at 24.790 kb on + strand, within p5482_29 at 24.790 kb on + strand, within p5482_29 at 24.790 kb on + strand, within p5482_29 at 24.790 kb on + strand, within p5482_29 at 24.791 kb on - strand, within p5482_29 at 24.791 kb on - strand, within p5482_29 at 24.806 kb on + strand, within p5482_29 at 24.818 kb on - strand, within p5482_29 at 24.820 kb on + strand, within p5482_29 at 24.820 kb on + strand, within p5482_29 at 24.820 kb on + strand, within p5482_29 at 24.821 kb on - strand, within p5482_29 at 24.821 kb on - strand, within p5482_29 at 24.833 kb on + strand, within p5482_29 at 24.834 kb on - strand, within p5482_29 at 24.845 kb on + strand, within p5482_29 at 24.845 kb on + strand, within p5482_29 at 24.845 kb on + strand, within p5482_29 at 24.845 kb on + strand, within p5482_29 at 24.846 kb on - strand, within p5482_29 at 24.846 kb on - strand, within p5482_29 at 24.846 kb on - strand, within p5482_29 at 24.846 kb on - strand, within p5482_29 at 24.846 kb on - strand, within p5482_29 at 24.898 kb on + strand, within p5482_29 at 24.910 kb on + strand, within p5482_29 at 24.911 kb on - strand, within p5482_29 at 24.911 kb on - strand, within p5482_29 at 24.911 kb on - strand, within p5482_29 at 24.928 kb on - strand, within p5482_29 at 24.928 kb on - strand, within p5482_29 at 24.948 kb on - strand, within p5482_29 at 24.948 kb on - strand, within p5482_29 at 24.952 kb on + strand, within p5482_29 at 25.081 kb on + strand, within p5482_29 at 25.081 kb on + strand, within p5482_29 at 25.081 kb on + strand, within p5482_29 at 25.082 kb on - strand, within p5482_29 at 25.114 kb on + strand, within p5482_29 at 25.114 kb on + strand at 25.114 kb on + strand, within p5482_29 at 25.115 kb on - strand, within p5482_29 at 25.115 kb on - strand, within p5482_29 at 25.115 kb on - strand, within p5482_29 at 25.129 kb on + strand, within p5482_29 at 25.136 kb on - strand, within p5482_29 at 25.138 kb on + strand, within p5482_29 at 25.139 kb on - strand, within p5482_29 at 25.139 kb on - strand, within p5482_29 at 25.139 kb on - strand, within p5482_29 at 25.139 kb on - strand, within p5482_29 at 25.139 kb on - strand, within p5482_29 at 25.147 kb on + strand, within p5482_29 at 25.147 kb on + strand, within p5482_29 at 25.147 kb on + strand, within p5482_29 at 25.147 kb on + strand, within p5482_29 at 25.148 kb on - strand, within p5482_29 at 25.148 kb on - strand, within p5482_29 at 25.148 kb on - strand, within p5482_29 at 25.148 kb on - strand, within p5482_29 at 25.148 kb on - strand, within p5482_29 at 25.148 kb on - strand, within p5482_29 at 25.154 kb on - strand, within p5482_29 at 25.162 kb on + strand, within p5482_29 at 25.163 kb on - strand, within p5482_29 at 25.163 kb on - strand, within p5482_29 at 25.164 kb on + strand, within p5482_29 at 25.164 kb on + strand, within p5482_29 at 25.165 kb on - strand, within p5482_29 at 25.165 kb on - strand, within p5482_29 at 25.283 kb on + strand, within p5482_29 at 25.283 kb on + strand, within p5482_29 at 25.319 kb on + strand, within p5482_29 at 25.319 kb on + strand, within p5482_29 at 25.319 kb on + strand, within p5482_29 at 25.320 kb on - strand, within p5482_29 at 25.320 kb on - strand, within p5482_29 at 25.360 kb on + strand, within p5482_29 at 25.360 kb on + strand, within p5482_29 at 25.361 kb on - strand, within p5482_29 at 25.364 kb on + strand, within p5482_29 at 25.364 kb on + strand, within p5482_29 at 25.364 kb on + strand, within p5482_29 at 25.365 kb on - strand, within p5482_29 at 25.388 kb on + strand at 25.388 kb on + strand at 25.388 kb on + strand at 25.388 kb on + strand at 25.463 kb on - strand at 25.463 kb on - strand at 25.463 kb on - strand at 25.470 kb on + strand at 25.470 kb on + strand at 25.500 kb on + strand at 25.500 kb on + strand at 25.500 kb on + strand at 25.501 kb on - strand at 25.501 kb on - strand at 25.503 kb on + strand at 25.503 kb on + strand at 25.504 kb on - strand at 25.504 kb on - strand at 25.523 kb on + strand at 25.523 kb on + strand at 25.524 kb on - strand at 25.529 kb on + strand at 25.530 kb on - strand at 25.530 kb on - strand at 25.581 kb on + strand at 25.583 kb on + strand at 25.597 kb on + strand at 25.597 kb on + strand at 25.598 kb on - strand at 25.598 kb on - strand at 25.598 kb on - strand at 25.598 kb on - strand at 25.598 kb on - strand at 25.615 kb on - strand at 25.657 kb on + strand at 25.657 kb on + strand at 25.657 kb on + strand at 25.658 kb on - strand at 25.658 kb on - strand at 25.658 kb on - strand at 25.659 kb on + strand at 25.659 kb on + strand at 25.676 kb on + strand at 25.676 kb on + strand at 25.677 kb on - strand at 25.677 kb on - strand at 25.677 kb on - strand at 25.679 kb on - strand at 25.679 kb on - strand at 25.679 kb on - strand at 25.933 kb on - strand at 25.933 kb on - strand at 25.939 kb on - strand at 25.944 kb on - strand at 25.944 kb on - strand at 25.968 kb on - strand at 26.211 kb on - strand, within p5482_31
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Dimethyl Sulfoxide 9 vol% remove 23,405 + -2.1 23,405 + +1.4 23,412 - +0.4 23,419 - -2.1 23,433 - -2.2 23,466 + p5482_28 0.12 +0.9 23,474 + p5482_28 0.12 -1.1 23,475 - p5482_28 0.13 -3.1 23,479 + p5482_28 0.13 -1.1 23,480 - p5482_28 0.13 +0.8 23,480 - p5482_28 0.13 +0.9 23,511 - p5482_28 0.16 -3.0 23,568 - p5482_28 0.22 -2.4 23,568 - p5482_28 0.22 -1.1 23,568 - p5482_28 0.22 -3.2 23,568 - p5482_28 0.22 +1.1 23,573 - p5482_28 0.23 +1.6 23,603 + p5482_28 0.26 -3.1 23,604 - p5482_28 0.26 +3.8 23,604 - p5482_28 0.26 -2.6 23,678 - p5482_28 0.34 +0.8 23,716 + p5482_28 0.37 -0.6 23,717 - p5482_28 0.38 +0.9 23,717 - p5482_28 0.38 +2.1 23,806 - p5482_28 0.47 -4.0 23,806 - p5482_28 0.47 -2.6 23,806 - p5482_28 0.47 +0.4 23,806 - p5482_28 0.47 +1.1 23,806 - p5482_28 0.47 +0.7 23,806 - p5482_28 0.47 -2.4 23,806 - p5482_28 0.47 -2.0 23,807 + p5482_28 0.47 -1.0 23,808 - p5482_28 0.47 +0.2 23,808 - p5482_28 0.47 -0.1 23,852 + p5482_28 0.51 -4.0 23,852 + p5482_28 0.51 +0.0 23,853 - p5482_28 0.52 +0.8 23,856 - p5482_28 0.52 +1.0 23,856 - p5482_28 0.52 -3.4 23,862 - p5482_28 0.53 -0.6 23,862 - p5482_28 0.53 -1.6 23,879 + p5482_28 0.54 +2.8 23,888 - p5482_28 0.55 +0.9 23,888 - p5482_28 0.55 +0.9 23,888 - p5482_28 0.55 -2.9 23,894 - p5482_28 0.56 -4.6 23,894 - p5482_28 0.56 +0.4 23,894 - p5482_28 0.56 -0.3 23,894 - p5482_28 0.56 +0.2 23,894 - p5482_28 0.56 +1.0 23,894 - p5482_28 0.56 +0.5 23,971 - p5482_28 0.64 -1.7 23,971 - p5482_28 0.64 +1.5 24,048 + p5482_28 0.72 -0.2 24,048 + p5482_28 0.72 +1.4 24,049 - p5482_28 0.72 +1.2 24,049 - p5482_28 0.72 -0.4 24,051 - p5482_28 0.72 +0.7 24,051 - p5482_28 0.72 -1.1 24,061 + p5482_28 0.73 -0.4 24,062 - p5482_28 0.73 -0.9 24,063 + p5482_28 0.73 +1.1 24,064 - p5482_28 0.73 -1.4 24,064 - p5482_28 0.73 -1.1 24,113 - p5482_28 0.78 +1.4 24,113 - p5482_28 0.78 -0.7 24,139 + p5482_28 0.81 -1.4 24,143 + p5482_28 0.82 -2.1 24,143 + p5482_28 0.82 -0.6 24,196 - p5482_28 0.87 +2.0 24,229 + -1.3 24,229 + -3.9 24,230 - -0.9 24,230 - -0.6 24,236 + +0.3 24,311 + +2.2 24,312 - +2.2 24,312 - +1.4 24,312 - -1.9 24,312 - -0.6 24,312 - +1.3 24,376 + -4.1 24,381 + +0.4 24,381 + -2.4 24,382 - -2.4 24,382 - -2.7 24,405 + -1.3 24,405 + +1.2 24,405 + -2.1 24,408 + -2.4 24,409 - -1.7 24,409 - -2.5 24,476 - +1.0 24,483 + p5482_29 0.11 +0.4 24,484 - p5482_29 0.11 +1.3 24,487 + p5482_29 0.11 -0.5 24,487 + p5482_29 0.11 -3.1 24,487 + p5482_29 0.11 +1.4 24,487 + p5482_29 0.11 +0.4 24,488 - p5482_29 0.11 -3.0 24,488 - p5482_29 0.11 -2.3 24,508 + p5482_29 0.13 +1.3 24,514 + p5482_29 0.13 +0.9 24,514 + p5482_29 0.13 -2.1 24,515 - p5482_29 0.13 +1.2 24,517 + p5482_29 0.14 +0.5 24,518 - p5482_29 0.14 +0.4 24,575 - p5482_29 0.19 -2.4 24,575 - p5482_29 0.19 +0.2 24,575 - p5482_29 0.19 +0.3 24,653 + p5482_29 0.26 +1.3 24,653 + p5482_29 0.26 -3.4 24,654 - p5482_29 0.26 +0.7 24,704 + p5482_29 0.30 +1.2 24,728 - p5482_29 0.32 +0.9 24,749 + p5482_29 0.34 +0.4 24,749 + p5482_29 0.34 -2.9 24,750 - p5482_29 0.34 +0.4 24,751 + p5482_29 0.34 -2.0 24,751 + p5482_29 0.34 +1.2 24,783 + p5482_29 0.37 +1.4 24,784 - p5482_29 0.37 -2.4 24,784 - p5482_29 0.37 -0.4 24,788 + p5482_29 0.38 -1.6 24,788 + p5482_29 0.38 -2.7 24,789 - p5482_29 0.38 +0.1 24,789 - p5482_29 0.38 -3.1 24,789 - p5482_29 0.38 +0.7 24,789 - p5482_29 0.38 -1.6 24,790 + p5482_29 0.38 -0.4 24,790 + p5482_29 0.38 +0.5 24,790 + p5482_29 0.38 +1.0 24,790 + p5482_29 0.38 +1.2 24,791 - p5482_29 0.38 -2.8 24,791 - p5482_29 0.38 -4.6 24,806 + p5482_29 0.39 -3.7 24,818 - p5482_29 0.40 +1.3 24,820 + p5482_29 0.41 +2.1 24,820 + p5482_29 0.41 -3.9 24,820 + p5482_29 0.41 -0.7 24,821 - p5482_29 0.41 -0.9 24,821 - p5482_29 0.41 +1.0 24,833 + p5482_29 0.42 -2.2 24,834 - p5482_29 0.42 +0.3 24,845 + p5482_29 0.43 -3.6 24,845 + p5482_29 0.43 -1.2 24,845 + p5482_29 0.43 +0.3 24,845 + p5482_29 0.43 -3.2 24,846 - p5482_29 0.43 +0.2 24,846 - p5482_29 0.43 -4.0 24,846 - p5482_29 0.43 -2.4 24,846 - p5482_29 0.43 -2.0 24,846 - p5482_29 0.43 +0.4 24,898 + p5482_29 0.48 -0.9 24,910 + p5482_29 0.49 -1.2 24,911 - p5482_29 0.49 -1.8 24,911 - p5482_29 0.49 +1.1 24,911 - p5482_29 0.49 -0.2 24,928 - p5482_29 0.50 +0.7 24,928 - p5482_29 0.50 +1.6 24,948 - p5482_29 0.52 -2.4 24,948 - p5482_29 0.52 +0.7 24,952 + p5482_29 0.52 +0.4 25,081 + p5482_29 0.64 +2.3 25,081 + p5482_29 0.64 -3.5 25,081 + p5482_29 0.64 -2.1 25,082 - p5482_29 0.64 +0.9 25,114 + p5482_29 0.67 +1.2 25,114 + +0.4 25,114 + p5482_29 0.67 -0.6 25,115 - p5482_29 0.67 +0.9 25,115 - p5482_29 0.67 -2.7 25,115 - p5482_29 0.67 +2.0 25,129 + p5482_29 0.68 -2.7 25,136 - p5482_29 0.69 -1.8 25,138 + p5482_29 0.69 +1.5 25,139 - p5482_29 0.69 +0.7 25,139 - p5482_29 0.69 +1.0 25,139 - p5482_29 0.69 +0.4 25,139 - p5482_29 0.69 +1.4 25,139 - p5482_29 0.69 +0.7 25,147 + p5482_29 0.70 -2.4 25,147 + p5482_29 0.70 +1.6 25,147 + p5482_29 0.70 +0.4 25,147 + p5482_29 0.70 +2.2 25,148 - p5482_29 0.70 +0.6 25,148 - p5482_29 0.70 +1.4 25,148 - p5482_29 0.70 +1.8 25,148 - p5482_29 0.70 +1.4 25,148 - p5482_29 0.70 +1.0 25,148 - p5482_29 0.70 +1.2 25,154 - p5482_29 0.70 +0.4 25,162 + p5482_29 0.71 -2.1 25,163 - p5482_29 0.71 -2.4 25,163 - p5482_29 0.71 +0.7 25,164 + p5482_29 0.71 +1.5 25,164 + p5482_29 0.71 -1.8 25,165 - p5482_29 0.71 -3.0 25,165 - p5482_29 0.71 -0.6 25,283 + p5482_29 0.82 +0.6 25,283 + p5482_29 0.82 +1.1 25,319 + p5482_29 0.85 -2.8 25,319 + p5482_29 0.85 +1.4 25,319 + p5482_29 0.85 -2.3 25,320 - p5482_29 0.85 -3.1 25,320 - p5482_29 0.85 +0.6 25,360 + p5482_29 0.89 -2.7 25,360 + p5482_29 0.89 +1.1 25,361 - p5482_29 0.89 +0.7 25,364 + p5482_29 0.89 -2.3 25,364 + p5482_29 0.89 +1.1 25,364 + p5482_29 0.89 +1.2 25,365 - p5482_29 0.89 +0.4 25,388 + -2.6 25,388 + -2.2 25,388 + -0.6 25,388 + -2.7 25,463 - -2.7 25,463 - -1.8 25,463 - +0.4 25,470 + -2.4 25,470 + +1.3 25,500 + +0.4 25,500 + +0.7 25,500 + +1.1 25,501 - +0.6 25,501 - +0.4 25,503 + -1.7 25,503 + -2.4 25,504 - -2.0 25,504 - -0.4 25,523 + -0.6 25,523 + -1.6 25,524 - -0.1 25,529 + -0.2 25,530 - -1.3 25,530 - -1.3 25,581 + -2.6 25,583 + -0.1 25,597 + -3.6 25,597 + -1.6 25,598 - -0.3 25,598 - -1.0 25,598 - -2.5 25,598 - +0.4 25,598 - -2.0 25,615 - -1.9 25,657 + -1.9 25,657 + +1.5 25,657 + -3.7 25,658 - -0.3 25,658 - -1.9 25,658 - +1.5 25,659 + -3.1 25,659 + +0.1 25,676 + +0.6 25,676 + +1.0 25,677 - +0.4 25,677 - -3.1 25,677 - +2.2 25,679 - +1.2 25,679 - +1.1 25,679 - -1.1 25,933 - +0.8 25,933 - -3.7 25,939 - +1.6 25,944 - -0.9 25,944 - -3.0 25,968 - +0.9 26,211 - p5482_31 0.36 +1.4
Or see this region's nucleotide sequence