Experiment: MoLS4 with L-Serine (N), without Molybdate/Tungstate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1942 and DVU1943 are separated by 86 nucleotides DVU1943 and oorD are separated by 272 nucleotides oorD and oorA are separated by 1 nucleotides
DVU1942: DVU1942 - DAK2 domain/degV family protein (TIGR), at 2,015,131 to 2,017,044
DVU1942
DVU1943: DVU1943 - hypothetical protein (TIGR), at 2,017,131 to 2,017,364
DVU1943
DVU1944: oorD - pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR), at 2,017,637 to 2,017,909
oorD
DVU1945: oorA - pyruvate ferredoxin oxidoreductase, alpha subunit, putative (TIGR), at 2,017,911 to 2,019,059
oorA
Position (kb)
2017
2018 Strain fitness (log2 ratio)
-1
0
1 at 2016.314 kb on + strand, within DVU1942 at 2016.357 kb on + strand, within DVU1942 at 2016.623 kb on + strand, within DVU1942 at 2016.645 kb on - strand, within DVU1942 at 2016.689 kb on - strand, within DVU1942 at 2016.765 kb on + strand, within DVU1942 at 2016.774 kb on - strand, within DVU1942 at 2016.889 kb on + strand at 2016.945 kb on + strand at 2016.994 kb on + strand at 2016.995 kb on + strand at 2017.003 kb on - strand at 2017.149 kb on + strand at 2017.202 kb on + strand, within DVU1943 at 2017.395 kb on + strand at 2017.504 kb on - strand at 2017.516 kb on - strand at 2017.558 kb on + strand at 2017.573 kb on - strand at 2017.655 kb on + strand at 2017.855 kb on + strand, within oorD at 2017.855 kb on + strand, within oorD at 2017.863 kb on - strand, within oorD at 2017.863 kb on - strand, within oorD at 2017.888 kb on + strand at 2017.939 kb on - strand at 2018.056 kb on - strand, within oorA at 2018.140 kb on + strand, within oorA at 2018.212 kb on - strand, within oorA at 2018.222 kb on + strand, within oorA at 2018.251 kb on - strand, within oorA at 2018.287 kb on + strand, within oorA at 2018.287 kb on + strand, within oorA at 2018.295 kb on - strand, within oorA at 2018.295 kb on - strand, within oorA at 2018.300 kb on - strand, within oorA at 2018.300 kb on - strand, within oorA
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without Molybdate/Tungstate remove 2,016,314 + DVU1942 0.62 +0.1 2,016,357 + DVU1942 0.64 -0.7 2,016,623 + DVU1942 0.78 -0.6 2,016,645 - DVU1942 0.79 +0.3 2,016,689 - DVU1942 0.81 +0.7 2,016,765 + DVU1942 0.85 -0.2 2,016,774 - DVU1942 0.86 -0.2 2,016,889 + +0.1 2,016,945 + +0.0 2,016,994 + -0.5 2,016,995 + +0.2 2,017,003 - +0.5 2,017,149 + -0.2 2,017,202 + DVU1943 0.30 +0.2 2,017,395 + +0.4 2,017,504 - -0.2 2,017,516 - +0.8 2,017,558 + -0.3 2,017,573 - +0.2 2,017,655 + -0.1 2,017,855 + oorD DVU1944 0.80 +1.0 2,017,855 + oorD DVU1944 0.80 -0.8 2,017,863 - oorD DVU1944 0.83 -0.1 2,017,863 - oorD DVU1944 0.83 +0.0 2,017,888 + +0.7 2,017,939 - +0.1 2,018,056 - oorA DVU1945 0.13 +0.2 2,018,140 + oorA DVU1945 0.20 +0.2 2,018,212 - oorA DVU1945 0.26 +0.1 2,018,222 + oorA DVU1945 0.27 +1.0 2,018,251 - oorA DVU1945 0.30 -0.2 2,018,287 + oorA DVU1945 0.33 -0.3 2,018,287 + oorA DVU1945 0.33 -0.3 2,018,295 - oorA DVU1945 0.33 -0.5 2,018,295 - oorA DVU1945 0.33 -0.5 2,018,300 - oorA DVU1945 0.34 -0.0 2,018,300 - oorA DVU1945 0.34 -0.4
Or see this region's nucleotide sequence