Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4899 and Psyr_4900 are separated by 498 nucleotides Psyr_4900 and Psyr_4901 are separated by 92 nucleotides
Psyr_4899: Psyr_4899 - Major facilitator superfamily, at 5,810,459 to 5,812,120
_4899
Psyr_4900: Psyr_4900 - AsmA, at 5,812,619 to 5,814,844
_4900
Psyr_4901: Psyr_4901 - A/G-specific DNA-adenine glycosylase, at 5,814,937 to 5,816,004
_4901
Position (kb) 5812
5813
5814
5815 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5811.628 kb on + strand, within Psyr_4899 at 5811.628 kb on + strand, within Psyr_4899 at 5811.628 kb on + strand, within Psyr_4899 at 5811.628 kb on + strand, within Psyr_4899 at 5811.628 kb on + strand, within Psyr_4899 at 5811.628 kb on + strand, within Psyr_4899 at 5811.629 kb on - strand, within Psyr_4899 at 5811.629 kb on - strand, within Psyr_4899 at 5811.629 kb on - strand, within Psyr_4899 at 5811.629 kb on - strand, within Psyr_4899 at 5811.630 kb on + strand, within Psyr_4899 at 5811.630 kb on + strand, within Psyr_4899 at 5811.630 kb on + strand, within Psyr_4899 at 5811.630 kb on + strand, within Psyr_4899 at 5811.630 kb on + strand, within Psyr_4899 at 5811.630 kb on + strand, within Psyr_4899 at 5811.630 kb on + strand, within Psyr_4899 at 5811.630 kb on + strand, within Psyr_4899 at 5811.630 kb on + strand, within Psyr_4899 at 5811.631 kb on - strand, within Psyr_4899 at 5811.631 kb on - strand, within Psyr_4899 at 5811.631 kb on - strand, within Psyr_4899 at 5811.631 kb on - strand, within Psyr_4899 at 5811.697 kb on + strand, within Psyr_4899 at 5811.697 kb on + strand, within Psyr_4899 at 5811.697 kb on + strand, within Psyr_4899 at 5811.698 kb on - strand, within Psyr_4899 at 5811.698 kb on - strand, within Psyr_4899 at 5811.698 kb on - strand, within Psyr_4899 at 5811.698 kb on - strand, within Psyr_4899 at 5811.699 kb on + strand, within Psyr_4899 at 5811.699 kb on + strand, within Psyr_4899 at 5811.699 kb on + strand, within Psyr_4899 at 5811.699 kb on + strand, within Psyr_4899 at 5811.700 kb on - strand, within Psyr_4899 at 5811.700 kb on - strand, within Psyr_4899 at 5811.700 kb on - strand, within Psyr_4899 at 5811.837 kb on + strand, within Psyr_4899 at 5811.837 kb on + strand, within Psyr_4899 at 5811.837 kb on + strand, within Psyr_4899 at 5811.837 kb on + strand, within Psyr_4899 at 5811.837 kb on + strand, within Psyr_4899 at 5811.838 kb on - strand, within Psyr_4899 at 5811.838 kb on - strand, within Psyr_4899 at 5811.838 kb on - strand, within Psyr_4899 at 5811.838 kb on - strand, within Psyr_4899 at 5811.838 kb on - strand, within Psyr_4899 at 5811.838 kb on - strand, within Psyr_4899 at 5811.838 kb on - strand, within Psyr_4899 at 5811.941 kb on - strand, within Psyr_4899 at 5812.121 kb on + strand at 5812.121 kb on + strand at 5812.122 kb on - strand at 5812.122 kb on - strand at 5812.122 kb on - strand at 5812.122 kb on - strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.123 kb on + strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.124 kb on - strand at 5812.127 kb on + strand at 5812.220 kb on + strand at 5812.262 kb on + strand at 5812.263 kb on - strand at 5812.263 kb on - strand at 5812.282 kb on + strand at 5812.282 kb on + strand at 5812.282 kb on + strand at 5812.282 kb on + strand at 5812.282 kb on + strand at 5812.283 kb on - strand at 5812.283 kb on - strand at 5812.283 kb on - strand at 5812.283 kb on - strand at 5812.283 kb on - strand at 5812.283 kb on - strand at 5812.283 kb on - strand at 5812.283 kb on - strand at 5812.283 kb on - strand at 5812.283 kb on - strand at 5812.294 kb on + strand at 5812.295 kb on - strand at 5812.295 kb on - strand at 5812.295 kb on - strand at 5812.295 kb on - strand at 5812.295 kb on - strand at 5812.305 kb on - strand at 5812.306 kb on - strand at 5812.306 kb on - strand at 5812.308 kb on + strand at 5812.309 kb on - strand at 5812.312 kb on + strand at 5812.313 kb on - strand at 5812.349 kb on + strand at 5812.350 kb on - strand at 5812.392 kb on + strand at 5812.392 kb on + strand at 5812.393 kb on - strand at 5812.393 kb on - strand at 5812.393 kb on - strand at 5812.446 kb on + strand at 5812.446 kb on + strand at 5812.446 kb on + strand at 5812.446 kb on + strand at 5812.447 kb on - strand at 5812.447 kb on - strand at 5812.448 kb on + strand at 5812.448 kb on + strand at 5812.448 kb on + strand at 5812.493 kb on - strand at 5812.576 kb on - strand at 5812.577 kb on + strand at 5812.577 kb on + strand at 5812.577 kb on + strand at 5812.577 kb on + strand at 5812.577 kb on + strand at 5812.577 kb on + strand at 5812.578 kb on - strand at 5812.578 kb on - strand at 5812.578 kb on - strand at 5812.578 kb on - strand at 5812.651 kb on + strand at 5812.652 kb on - strand at 5812.652 kb on - strand at 5812.929 kb on + strand, within Psyr_4900 at 5812.929 kb on + strand, within Psyr_4900 at 5812.930 kb on - strand, within Psyr_4900 at 5812.930 kb on - strand, within Psyr_4900 at 5812.930 kb on - strand, within Psyr_4900 at 5813.662 kb on + strand, within Psyr_4900 at 5813.662 kb on + strand, within Psyr_4900 at 5813.662 kb on + strand, within Psyr_4900 at 5813.663 kb on - strand, within Psyr_4900 at 5813.966 kb on - strand, within Psyr_4900 at 5813.966 kb on - strand, within Psyr_4900 at 5813.966 kb on - strand, within Psyr_4900 at 5813.966 kb on - strand, within Psyr_4900 at 5814.095 kb on + strand, within Psyr_4900 at 5814.095 kb on + strand, within Psyr_4900 at 5814.095 kb on + strand, within Psyr_4900 at 5814.095 kb on + strand, within Psyr_4900 at 5814.096 kb on - strand, within Psyr_4900 at 5814.096 kb on - strand, within Psyr_4900 at 5814.096 kb on - strand, within Psyr_4900 at 5814.096 kb on - strand, within Psyr_4900 at 5814.096 kb on - strand, within Psyr_4900 at 5814.159 kb on + strand, within Psyr_4900 at 5814.159 kb on + strand, within Psyr_4900 at 5814.159 kb on + strand, within Psyr_4900 at 5814.159 kb on + strand, within Psyr_4900 at 5814.159 kb on + strand, within Psyr_4900 at 5814.159 kb on + strand, within Psyr_4900 at 5814.160 kb on - strand, within Psyr_4900 at 5814.160 kb on - strand, within Psyr_4900 at 5814.160 kb on - strand, within Psyr_4900 at 5814.373 kb on + strand, within Psyr_4900 at 5814.373 kb on + strand, within Psyr_4900 at 5814.373 kb on + strand, within Psyr_4900 at 5814.374 kb on - strand, within Psyr_4900 at 5814.459 kb on + strand, within Psyr_4900 at 5814.560 kb on + strand, within Psyr_4900 at 5814.843 kb on - strand at 5814.901 kb on - strand at 5815.087 kb on + strand, within Psyr_4901 at 5815.087 kb on + strand, within Psyr_4901 at 5815.087 kb on + strand, within Psyr_4901 at 5815.088 kb on - strand, within Psyr_4901 at 5815.154 kb on + strand, within Psyr_4901 at 5815.154 kb on + strand, within Psyr_4901 at 5815.154 kb on + strand, within Psyr_4901 at 5815.154 kb on + strand, within Psyr_4901 at 5815.154 kb on + strand, within Psyr_4901 at 5815.155 kb on - strand, within Psyr_4901 at 5815.155 kb on - strand, within Psyr_4901 at 5815.155 kb on - strand, within Psyr_4901 at 5815.155 kb on - strand, within Psyr_4901 at 5815.155 kb on - strand, within Psyr_4901 at 5815.155 kb on - strand, within Psyr_4901 at 5815.155 kb on - strand, within Psyr_4901 at 5815.155 kb on - strand, within Psyr_4901 at 5815.183 kb on + strand, within Psyr_4901 at 5815.183 kb on + strand, within Psyr_4901 at 5815.183 kb on + strand, within Psyr_4901 at 5815.184 kb on - strand, within Psyr_4901 at 5815.184 kb on - strand, within Psyr_4901 at 5815.184 kb on - strand, within Psyr_4901 at 5815.474 kb on + strand, within Psyr_4901 at 5815.474 kb on + strand, within Psyr_4901 at 5815.474 kb on + strand, within Psyr_4901 at 5815.474 kb on + strand, within Psyr_4901 at 5815.474 kb on + strand, within Psyr_4901 at 5815.474 kb on + strand, within Psyr_4901 at 5815.474 kb on + strand, within Psyr_4901 at 5815.474 kb on + strand, within Psyr_4901 at 5815.475 kb on - strand, within Psyr_4901 at 5815.475 kb on - strand, within Psyr_4901 at 5815.475 kb on - strand, within Psyr_4901 at 5815.809 kb on + strand, within Psyr_4901 at 5815.810 kb on - strand, within Psyr_4901
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 5,811,628 + Psyr_4899 0.70 -0.6 5,811,628 + Psyr_4899 0.70 +0.1 5,811,628 + Psyr_4899 0.70 +0.5 5,811,628 + Psyr_4899 0.70 -0.6 5,811,628 + Psyr_4899 0.70 -1.1 5,811,628 + Psyr_4899 0.70 +0.0 5,811,629 - Psyr_4899 0.70 +0.3 5,811,629 - Psyr_4899 0.70 -0.5 5,811,629 - Psyr_4899 0.70 +0.3 5,811,629 - Psyr_4899 0.70 +0.6 5,811,630 + Psyr_4899 0.70 +0.1 5,811,630 + Psyr_4899 0.70 -1.5 5,811,630 + Psyr_4899 0.70 -0.7 5,811,630 + Psyr_4899 0.70 +0.1 5,811,630 + Psyr_4899 0.70 -0.6 5,811,630 + Psyr_4899 0.70 +0.1 5,811,630 + Psyr_4899 0.70 -1.8 5,811,630 + Psyr_4899 0.70 +1.0 5,811,630 + Psyr_4899 0.70 +0.1 5,811,631 - Psyr_4899 0.71 -0.3 5,811,631 - Psyr_4899 0.71 +0.9 5,811,631 - Psyr_4899 0.71 -1.0 5,811,631 - Psyr_4899 0.71 -1.4 5,811,697 + Psyr_4899 0.74 -0.6 5,811,697 + Psyr_4899 0.74 +1.0 5,811,697 + Psyr_4899 0.74 -0.1 5,811,698 - Psyr_4899 0.75 -0.4 5,811,698 - Psyr_4899 0.75 +1.2 5,811,698 - Psyr_4899 0.75 -1.0 5,811,698 - Psyr_4899 0.75 -1.6 5,811,699 + Psyr_4899 0.75 +0.3 5,811,699 + Psyr_4899 0.75 -0.4 5,811,699 + Psyr_4899 0.75 -0.9 5,811,699 + Psyr_4899 0.75 +0.1 5,811,700 - Psyr_4899 0.75 -0.3 5,811,700 - Psyr_4899 0.75 -0.8 5,811,700 - Psyr_4899 0.75 -0.3 5,811,837 + Psyr_4899 0.83 +0.4 5,811,837 + Psyr_4899 0.83 +2.0 5,811,837 + Psyr_4899 0.83 -0.4 5,811,837 + Psyr_4899 0.83 -0.1 5,811,837 + Psyr_4899 0.83 +0.7 5,811,838 - Psyr_4899 0.83 -0.3 5,811,838 - Psyr_4899 0.83 -1.4 5,811,838 - Psyr_4899 0.83 +0.5 5,811,838 - Psyr_4899 0.83 +0.6 5,811,838 - Psyr_4899 0.83 -0.3 5,811,838 - Psyr_4899 0.83 +1.1 5,811,838 - Psyr_4899 0.83 +0.6 5,811,941 - Psyr_4899 0.89 -0.0 5,812,121 + -0.8 5,812,121 + -0.6 5,812,122 - -0.8 5,812,122 - +1.1 5,812,122 - +2.4 5,812,122 - +0.1 5,812,123 + +0.5 5,812,123 + -1.0 5,812,123 + -0.4 5,812,123 + +1.0 5,812,123 + -0.1 5,812,123 + +0.7 5,812,123 + -0.2 5,812,123 + +0.8 5,812,123 + -0.5 5,812,123 + -0.2 5,812,123 + +0.1 5,812,124 - -0.0 5,812,124 - -0.4 5,812,124 - -0.4 5,812,124 - +0.3 5,812,124 - -1.0 5,812,124 - -0.8 5,812,124 - +0.1 5,812,124 - +0.7 5,812,124 - -0.4 5,812,124 - +0.2 5,812,124 - -0.1 5,812,127 + -0.7 5,812,220 + -0.0 5,812,262 + -0.4 5,812,263 - +1.6 5,812,263 - +0.1 5,812,282 + -0.2 5,812,282 + -0.1 5,812,282 + -0.0 5,812,282 + -1.6 5,812,282 + +1.4 5,812,283 - +0.2 5,812,283 - -1.5 5,812,283 - +0.1 5,812,283 - +0.3 5,812,283 - +1.7 5,812,283 - +0.6 5,812,283 - -0.3 5,812,283 - -0.6 5,812,283 - +0.2 5,812,283 - -0.1 5,812,294 + -1.2 5,812,295 - -0.4 5,812,295 - +0.1 5,812,295 - +0.2 5,812,295 - -0.4 5,812,295 - +0.6 5,812,305 - +0.2 5,812,306 - -0.9 5,812,306 - +1.2 5,812,308 + -0.3 5,812,309 - -0.0 5,812,312 + -0.6 5,812,313 - -0.2 5,812,349 + +0.6 5,812,350 - +1.0 5,812,392 + -0.4 5,812,392 + -0.0 5,812,393 - +0.2 5,812,393 - +0.4 5,812,393 - +0.1 5,812,446 + -1.6 5,812,446 + -0.4 5,812,446 + -1.6 5,812,446 + -0.0 5,812,447 - +1.4 5,812,447 - +0.0 5,812,448 + -1.2 5,812,448 + -1.1 5,812,448 + +0.1 5,812,493 - +1.2 5,812,576 - +1.3 5,812,577 + -0.3 5,812,577 + +0.7 5,812,577 + -0.3 5,812,577 + -0.5 5,812,577 + -1.8 5,812,577 + +0.8 5,812,578 - -1.2 5,812,578 - -0.7 5,812,578 - +0.6 5,812,578 - +0.5 5,812,651 + +0.2 5,812,652 - -1.0 5,812,652 - +0.2 5,812,929 + Psyr_4900 0.14 +0.7 5,812,929 + Psyr_4900 0.14 -1.7 5,812,930 - Psyr_4900 0.14 +0.1 5,812,930 - Psyr_4900 0.14 -0.3 5,812,930 - Psyr_4900 0.14 -0.6 5,813,662 + Psyr_4900 0.47 +1.6 5,813,662 + Psyr_4900 0.47 +2.1 5,813,662 + Psyr_4900 0.47 +1.0 5,813,663 - Psyr_4900 0.47 +0.4 5,813,966 - Psyr_4900 0.61 -0.0 5,813,966 - Psyr_4900 0.61 -0.9 5,813,966 - Psyr_4900 0.61 +2.2 5,813,966 - Psyr_4900 0.61 +0.4 5,814,095 + Psyr_4900 0.66 +2.0 5,814,095 + Psyr_4900 0.66 -0.0 5,814,095 + Psyr_4900 0.66 -1.2 5,814,095 + Psyr_4900 0.66 +0.3 5,814,096 - Psyr_4900 0.66 -0.0 5,814,096 - Psyr_4900 0.66 +0.4 5,814,096 - Psyr_4900 0.66 -0.1 5,814,096 - Psyr_4900 0.66 +1.6 5,814,096 - Psyr_4900 0.66 +0.6 5,814,159 + Psyr_4900 0.69 +1.2 5,814,159 + Psyr_4900 0.69 -0.0 5,814,159 + Psyr_4900 0.69 +1.3 5,814,159 + Psyr_4900 0.69 -0.2 5,814,159 + Psyr_4900 0.69 +0.8 5,814,159 + Psyr_4900 0.69 +0.3 5,814,160 - Psyr_4900 0.69 +0.9 5,814,160 - Psyr_4900 0.69 +0.6 5,814,160 - Psyr_4900 0.69 +0.2 5,814,373 + Psyr_4900 0.79 +0.3 5,814,373 + Psyr_4900 0.79 +1.2 5,814,373 + Psyr_4900 0.79 +0.0 5,814,374 - Psyr_4900 0.79 +2.2 5,814,459 + Psyr_4900 0.83 -0.0 5,814,560 + Psyr_4900 0.87 -0.6 5,814,843 - -1.1 5,814,901 - +0.1 5,815,087 + Psyr_4901 0.14 +1.7 5,815,087 + Psyr_4901 0.14 +1.1 5,815,087 + Psyr_4901 0.14 +1.5 5,815,088 - Psyr_4901 0.14 -0.2 5,815,154 + Psyr_4901 0.20 +0.1 5,815,154 + Psyr_4901 0.20 -0.1 5,815,154 + Psyr_4901 0.20 -0.8 5,815,154 + Psyr_4901 0.20 -0.1 5,815,154 + Psyr_4901 0.20 +0.6 5,815,155 - Psyr_4901 0.20 +0.6 5,815,155 - Psyr_4901 0.20 -0.5 5,815,155 - Psyr_4901 0.20 +1.6 5,815,155 - Psyr_4901 0.20 +0.4 5,815,155 - Psyr_4901 0.20 +0.3 5,815,155 - Psyr_4901 0.20 +0.2 5,815,155 - Psyr_4901 0.20 -0.3 5,815,155 - Psyr_4901 0.20 +0.4 5,815,183 + Psyr_4901 0.23 -0.6 5,815,183 + Psyr_4901 0.23 +0.9 5,815,183 + Psyr_4901 0.23 -0.4 5,815,184 - Psyr_4901 0.23 +0.1 5,815,184 - Psyr_4901 0.23 -0.3 5,815,184 - Psyr_4901 0.23 -2.4 5,815,474 + Psyr_4901 0.50 +0.7 5,815,474 + Psyr_4901 0.50 -0.1 5,815,474 + Psyr_4901 0.50 +0.2 5,815,474 + Psyr_4901 0.50 -0.1 5,815,474 + Psyr_4901 0.50 +1.6 5,815,474 + Psyr_4901 0.50 +0.7 5,815,474 + Psyr_4901 0.50 +0.4 5,815,474 + Psyr_4901 0.50 -0.2 5,815,475 - Psyr_4901 0.50 +1.8 5,815,475 - Psyr_4901 0.50 -1.4 5,815,475 - Psyr_4901 0.50 +0.5 5,815,809 + Psyr_4901 0.82 -1.1 5,815,810 - Psyr_4901 0.82 +0.3
Or see this region's nucleotide sequence