Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3594 and Psyr_3595 are separated by 10 nucleotides Psyr_3595 and Psyr_3596 are separated by 93 nucleotides Psyr_3596 and Psyr_3597 are separated by 52 nucleotides Psyr_3597 and Psyr_3598 are separated by 4 nucleotides
Psyr_3594: Psyr_3594 - membrane protein-like protein, at 4,276,656 to 4,276,967
_3594
Psyr_3595: Psyr_3595 - Metallophosphoesterase, at 4,276,978 to 4,277,799
_3595
Psyr_3596: Psyr_3596 - Selenoprotein W-related protein, at 4,277,893 to 4,278,195
_3596
Psyr_3597: Psyr_3597 - ABC transporter, at 4,278,248 to 4,279,072
_3597
Psyr_3598: Psyr_3598 - Binding-protein-dependent transport systems inner membrane component, at 4,279,077 to 4,279,934
_3598
Position (kb) 4277
4278
4279 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4276.932 kb on + strand, within Psyr_3594 at 4276.933 kb on - strand, within Psyr_3594 at 4276.933 kb on - strand, within Psyr_3594 at 4276.965 kb on + strand at 4276.966 kb on - strand at 4277.123 kb on + strand, within Psyr_3595 at 4277.300 kb on + strand, within Psyr_3595 at 4277.300 kb on + strand, within Psyr_3595 at 4277.300 kb on + strand, within Psyr_3595 at 4277.301 kb on - strand, within Psyr_3595 at 4277.301 kb on - strand, within Psyr_3595 at 4277.301 kb on - strand, within Psyr_3595 at 4277.351 kb on + strand, within Psyr_3595 at 4277.388 kb on - strand, within Psyr_3595 at 4277.537 kb on + strand, within Psyr_3595 at 4277.538 kb on - strand, within Psyr_3595 at 4277.538 kb on - strand, within Psyr_3595 at 4277.538 kb on - strand, within Psyr_3595 at 4277.538 kb on - strand, within Psyr_3595 at 4277.538 kb on - strand, within Psyr_3595 at 4277.609 kb on + strand, within Psyr_3595 at 4277.609 kb on + strand, within Psyr_3595 at 4277.609 kb on + strand, within Psyr_3595 at 4277.610 kb on - strand, within Psyr_3595 at 4277.610 kb on - strand, within Psyr_3595 at 4277.610 kb on - strand, within Psyr_3595 at 4277.610 kb on - strand, within Psyr_3595 at 4277.610 kb on - strand, within Psyr_3595 at 4277.657 kb on + strand, within Psyr_3595 at 4277.658 kb on - strand, within Psyr_3595 at 4277.658 kb on - strand, within Psyr_3595 at 4277.801 kb on + strand at 4277.801 kb on + strand at 4277.891 kb on + strand at 4277.891 kb on + strand at 4277.891 kb on + strand at 4277.891 kb on + strand at 4277.892 kb on - strand at 4277.894 kb on + strand at 4277.895 kb on - strand at 4277.895 kb on - strand at 4277.913 kb on + strand at 4277.913 kb on + strand at 4277.913 kb on + strand at 4277.913 kb on + strand at 4277.914 kb on - strand at 4278.039 kb on + strand, within Psyr_3596 at 4278.039 kb on + strand, within Psyr_3596 at 4278.161 kb on + strand, within Psyr_3596 at 4278.161 kb on + strand, within Psyr_3596 at 4278.161 kb on + strand, within Psyr_3596 at 4278.161 kb on + strand, within Psyr_3596 at 4278.162 kb on - strand, within Psyr_3596 at 4278.230 kb on + strand at 4278.231 kb on - strand at 4278.752 kb on - strand, within Psyr_3597 at 4279.010 kb on + strand at 4279.011 kb on - strand at 4279.011 kb on - strand at 4279.165 kb on + strand, within Psyr_3598 at 4279.165 kb on + strand, within Psyr_3598 at 4279.165 kb on + strand, within Psyr_3598 at 4279.165 kb on + strand, within Psyr_3598 at 4279.165 kb on + strand, within Psyr_3598 at 4279.165 kb on + strand, within Psyr_3598 at 4279.165 kb on + strand, within Psyr_3598 at 4279.166 kb on - strand, within Psyr_3598 at 4279.181 kb on + strand, within Psyr_3598
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 4,276,932 + Psyr_3594 0.88 -0.3 4,276,933 - Psyr_3594 0.89 -1.7 4,276,933 - Psyr_3594 0.89 -0.0 4,276,965 + +1.5 4,276,966 - +0.2 4,277,123 + Psyr_3595 0.18 -0.1 4,277,300 + Psyr_3595 0.39 -0.3 4,277,300 + Psyr_3595 0.39 +0.2 4,277,300 + Psyr_3595 0.39 +0.2 4,277,301 - Psyr_3595 0.39 +0.3 4,277,301 - Psyr_3595 0.39 +0.3 4,277,301 - Psyr_3595 0.39 +0.5 4,277,351 + Psyr_3595 0.45 +1.4 4,277,388 - Psyr_3595 0.50 +0.7 4,277,537 + Psyr_3595 0.68 +0.5 4,277,538 - Psyr_3595 0.68 +0.1 4,277,538 - Psyr_3595 0.68 +1.0 4,277,538 - Psyr_3595 0.68 +0.4 4,277,538 - Psyr_3595 0.68 +1.4 4,277,538 - Psyr_3595 0.68 -0.8 4,277,609 + Psyr_3595 0.77 -0.6 4,277,609 + Psyr_3595 0.77 -0.5 4,277,609 + Psyr_3595 0.77 -0.9 4,277,610 - Psyr_3595 0.77 -0.2 4,277,610 - Psyr_3595 0.77 +0.8 4,277,610 - Psyr_3595 0.77 -0.5 4,277,610 - Psyr_3595 0.77 -0.7 4,277,610 - Psyr_3595 0.77 -1.1 4,277,657 + Psyr_3595 0.83 -1.4 4,277,658 - Psyr_3595 0.83 +2.6 4,277,658 - Psyr_3595 0.83 +0.1 4,277,801 + +0.8 4,277,801 + -0.8 4,277,891 + +0.1 4,277,891 + +1.2 4,277,891 + +0.3 4,277,891 + +0.1 4,277,892 - +0.2 4,277,894 + +0.1 4,277,895 - -1.2 4,277,895 - +0.0 4,277,913 + -0.8 4,277,913 + +0.4 4,277,913 + -0.5 4,277,913 + +0.3 4,277,914 - +0.4 4,278,039 + Psyr_3596 0.48 -0.1 4,278,039 + Psyr_3596 0.48 -0.9 4,278,161 + Psyr_3596 0.88 +0.0 4,278,161 + Psyr_3596 0.88 +0.3 4,278,161 + Psyr_3596 0.88 -1.3 4,278,161 + Psyr_3596 0.88 -1.1 4,278,162 - Psyr_3596 0.89 -1.0 4,278,230 + -0.5 4,278,231 - -0.1 4,278,752 - Psyr_3597 0.61 -0.1 4,279,010 + +0.6 4,279,011 - +0.0 4,279,011 - -0.1 4,279,165 + Psyr_3598 0.10 +0.1 4,279,165 + Psyr_3598 0.10 +0.5 4,279,165 + Psyr_3598 0.10 +1.2 4,279,165 + Psyr_3598 0.10 +1.5 4,279,165 + Psyr_3598 0.10 +1.0 4,279,165 + Psyr_3598 0.10 -0.7 4,279,165 + Psyr_3598 0.10 -0.5 4,279,166 - Psyr_3598 0.10 +0.6 4,279,181 + Psyr_3598 0.12 -2.5
Or see this region's nucleotide sequence