Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2296 and Psyr_2297 are separated by 66 nucleotides Psyr_2297 and Psyr_2298 overlap by 8 nucleotides
Psyr_2296: Psyr_2296 - Aldo/keto reductase, at 2,668,183 to 2,669,220
_2296
Psyr_2297: Psyr_2297 - glucose 1-dehydrogenase, at 2,669,287 to 2,670,087
_2297
Psyr_2298: Psyr_2298 - Glycoside hydrolase, family 15, at 2,670,080 to 2,671,906
_2298
Position (kb)
2669
2670
2671 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2668.340 kb on - strand, within Psyr_2296 at 2668.366 kb on + strand, within Psyr_2296 at 2668.367 kb on - strand, within Psyr_2296 at 2668.367 kb on - strand, within Psyr_2296 at 2668.367 kb on - strand, within Psyr_2296 at 2668.408 kb on + strand, within Psyr_2296 at 2668.409 kb on - strand, within Psyr_2296 at 2668.802 kb on - strand, within Psyr_2296 at 2668.876 kb on + strand, within Psyr_2296 at 2668.912 kb on + strand, within Psyr_2296 at 2668.913 kb on - strand, within Psyr_2296 at 2668.973 kb on - strand, within Psyr_2296 at 2669.008 kb on + strand, within Psyr_2296 at 2669.063 kb on - strand, within Psyr_2296 at 2669.063 kb on - strand, within Psyr_2296 at 2669.259 kb on + strand at 2669.259 kb on + strand at 2669.260 kb on - strand at 2669.260 kb on - strand at 2669.262 kb on + strand at 2669.262 kb on + strand at 2669.262 kb on + strand at 2669.262 kb on + strand at 2669.263 kb on - strand at 2669.263 kb on - strand at 2669.398 kb on + strand, within Psyr_2297 at 2669.399 kb on - strand, within Psyr_2297 at 2669.399 kb on - strand, within Psyr_2297 at 2669.617 kb on - strand, within Psyr_2297 at 2669.780 kb on - strand, within Psyr_2297 at 2670.016 kb on + strand at 2670.017 kb on - strand at 2670.017 kb on - strand at 2670.299 kb on + strand, within Psyr_2298 at 2670.299 kb on + strand, within Psyr_2298 at 2670.299 kb on + strand, within Psyr_2298 at 2670.300 kb on - strand, within Psyr_2298 at 2670.740 kb on + strand, within Psyr_2298 at 2670.741 kb on - strand, within Psyr_2298 at 2670.885 kb on - strand, within Psyr_2298 at 2670.917 kb on + strand, within Psyr_2298 at 2670.917 kb on + strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298 at 2670.918 kb on - strand, within Psyr_2298
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 2,668,340 - Psyr_2296 0.15 +0.4 2,668,366 + Psyr_2296 0.18 -0.8 2,668,367 - Psyr_2296 0.18 -0.6 2,668,367 - Psyr_2296 0.18 +0.7 2,668,367 - Psyr_2296 0.18 -0.0 2,668,408 + Psyr_2296 0.22 -0.3 2,668,409 - Psyr_2296 0.22 -0.9 2,668,802 - Psyr_2296 0.60 +0.1 2,668,876 + Psyr_2296 0.67 -0.1 2,668,912 + Psyr_2296 0.70 +1.1 2,668,913 - Psyr_2296 0.70 -2.0 2,668,973 - Psyr_2296 0.76 +0.7 2,669,008 + Psyr_2296 0.79 +0.7 2,669,063 - Psyr_2296 0.85 -0.5 2,669,063 - Psyr_2296 0.85 +0.5 2,669,259 + +0.7 2,669,259 + -1.0 2,669,260 - -1.2 2,669,260 - +1.2 2,669,262 + +1.5 2,669,262 + -0.7 2,669,262 + +0.9 2,669,262 + +2.5 2,669,263 - +0.4 2,669,263 - -0.6 2,669,398 + Psyr_2297 0.14 +0.7 2,669,399 - Psyr_2297 0.14 +0.2 2,669,399 - Psyr_2297 0.14 +2.0 2,669,617 - Psyr_2297 0.41 +1.0 2,669,780 - Psyr_2297 0.62 +0.5 2,670,016 + +2.0 2,670,017 - -1.2 2,670,017 - +0.4 2,670,299 + Psyr_2298 0.12 -1.3 2,670,299 + Psyr_2298 0.12 +0.1 2,670,299 + Psyr_2298 0.12 -2.2 2,670,300 - Psyr_2298 0.12 -0.5 2,670,740 + Psyr_2298 0.36 +2.4 2,670,741 - Psyr_2298 0.36 -0.2 2,670,885 - Psyr_2298 0.44 +0.6 2,670,917 + Psyr_2298 0.46 +1.0 2,670,917 + Psyr_2298 0.46 -0.1 2,670,918 - Psyr_2298 0.46 +1.4 2,670,918 - Psyr_2298 0.46 +0.0 2,670,918 - Psyr_2298 0.46 -0.2 2,670,918 - Psyr_2298 0.46 +0.0 2,670,918 - Psyr_2298 0.46 +2.0
Or see this region's nucleotide sequence