Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2186 and Psyr_2187 are separated by 83 nucleotides Psyr_2187 and Psyr_2188 are separated by 591 nucleotides
Psyr_2186: Psyr_2186 - Senescence marker protein-30 (SMP-30), at 2,540,031 to 2,540,909
_2186
Psyr_2187: Psyr_2187 - General substrate transporter:Major facilitator superfamily, at 2,540,993 to 2,542,315
_2187
Psyr_2188: Psyr_2188 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer:CHASE3, at 2,542,907 to 2,544,529
_2188
Position (kb)
2540
2541
2542
2543 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2540.063 kb on + strand at 2540.064 kb on - strand at 2540.110 kb on - strand at 2540.256 kb on + strand, within Psyr_2186 at 2540.256 kb on + strand, within Psyr_2186 at 2540.256 kb on + strand, within Psyr_2186 at 2540.256 kb on + strand, within Psyr_2186 at 2540.256 kb on + strand, within Psyr_2186 at 2540.256 kb on + strand, within Psyr_2186 at 2540.256 kb on + strand, within Psyr_2186 at 2540.256 kb on + strand, within Psyr_2186 at 2540.256 kb on + strand, within Psyr_2186 at 2540.257 kb on - strand, within Psyr_2186 at 2540.257 kb on - strand, within Psyr_2186 at 2540.257 kb on - strand, within Psyr_2186 at 2540.257 kb on - strand, within Psyr_2186 at 2540.258 kb on + strand, within Psyr_2186 at 2540.506 kb on - strand, within Psyr_2186 at 2540.506 kb on - strand, within Psyr_2186 at 2540.541 kb on + strand, within Psyr_2186 at 2541.002 kb on - strand at 2541.087 kb on - strand at 2541.284 kb on - strand, within Psyr_2187 at 2541.284 kb on - strand, within Psyr_2187 at 2541.424 kb on - strand, within Psyr_2187 at 2541.518 kb on + strand, within Psyr_2187 at 2541.518 kb on + strand, within Psyr_2187 at 2541.519 kb on - strand, within Psyr_2187 at 2541.540 kb on - strand, within Psyr_2187 at 2541.540 kb on - strand, within Psyr_2187 at 2541.626 kb on + strand, within Psyr_2187 at 2541.627 kb on - strand, within Psyr_2187 at 2541.684 kb on + strand, within Psyr_2187 at 2541.684 kb on + strand, within Psyr_2187 at 2541.684 kb on + strand, within Psyr_2187 at 2541.685 kb on - strand, within Psyr_2187 at 2541.685 kb on - strand, within Psyr_2187 at 2541.776 kb on + strand, within Psyr_2187 at 2541.776 kb on + strand, within Psyr_2187 at 2541.776 kb on + strand, within Psyr_2187 at 2541.776 kb on + strand, within Psyr_2187 at 2541.776 kb on + strand, within Psyr_2187 at 2541.777 kb on - strand, within Psyr_2187 at 2541.777 kb on - strand, within Psyr_2187 at 2541.777 kb on - strand, within Psyr_2187 at 2541.777 kb on - strand, within Psyr_2187 at 2541.777 kb on - strand, within Psyr_2187 at 2541.777 kb on - strand, within Psyr_2187 at 2541.777 kb on - strand, within Psyr_2187 at 2541.806 kb on + strand, within Psyr_2187 at 2541.812 kb on + strand, within Psyr_2187 at 2541.812 kb on + strand, within Psyr_2187 at 2541.812 kb on + strand, within Psyr_2187 at 2541.812 kb on + strand, within Psyr_2187 at 2541.813 kb on - strand, within Psyr_2187 at 2541.813 kb on - strand, within Psyr_2187 at 2541.813 kb on - strand, within Psyr_2187 at 2541.813 kb on - strand, within Psyr_2187 at 2541.980 kb on + strand, within Psyr_2187 at 2541.980 kb on + strand, within Psyr_2187 at 2541.981 kb on - strand, within Psyr_2187 at 2541.981 kb on - strand, within Psyr_2187 at 2542.058 kb on + strand, within Psyr_2187 at 2542.058 kb on + strand, within Psyr_2187 at 2542.058 kb on + strand, within Psyr_2187 at 2542.058 kb on + strand, within Psyr_2187 at 2542.058 kb on + strand, within Psyr_2187 at 2542.058 kb on + strand, within Psyr_2187 at 2542.059 kb on - strand, within Psyr_2187 at 2542.059 kb on - strand, within Psyr_2187 at 2542.059 kb on - strand, within Psyr_2187 at 2542.062 kb on - strand, within Psyr_2187 at 2542.062 kb on - strand, within Psyr_2187 at 2542.213 kb on + strand at 2542.214 kb on - strand at 2542.214 kb on - strand at 2542.214 kb on - strand at 2542.369 kb on + strand at 2542.369 kb on + strand at 2542.370 kb on - strand at 2542.370 kb on - strand at 2542.374 kb on + strand at 2542.375 kb on - strand at 2542.375 kb on - strand at 2542.375 kb on - strand at 2542.561 kb on + strand at 2542.760 kb on - strand at 2542.850 kb on - strand at 2542.888 kb on + strand at 2542.941 kb on - strand at 2542.965 kb on + strand at 2542.965 kb on + strand at 2542.965 kb on + strand at 2542.965 kb on + strand at 2542.966 kb on - strand at 2542.995 kb on - strand at 2543.026 kb on + strand at 2543.026 kb on + strand at 2543.026 kb on + strand at 2543.027 kb on - strand at 2543.041 kb on + strand at 2543.042 kb on - strand at 2543.042 kb on - strand at 2543.042 kb on - strand at 2543.045 kb on + strand at 2543.045 kb on + strand at 2543.046 kb on - strand at 2543.046 kb on - strand at 2543.046 kb on - strand at 2543.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 2,540,063 + +0.1 2,540,064 - -0.1 2,540,110 - -0.9 2,540,256 + Psyr_2186 0.26 -0.8 2,540,256 + Psyr_2186 0.26 -0.3 2,540,256 + Psyr_2186 0.26 -1.0 2,540,256 + Psyr_2186 0.26 +0.6 2,540,256 + Psyr_2186 0.26 -1.3 2,540,256 + Psyr_2186 0.26 -2.2 2,540,256 + Psyr_2186 0.26 +0.8 2,540,256 + Psyr_2186 0.26 +0.2 2,540,256 + Psyr_2186 0.26 -0.9 2,540,257 - Psyr_2186 0.26 +0.4 2,540,257 - Psyr_2186 0.26 +0.6 2,540,257 - Psyr_2186 0.26 +0.1 2,540,257 - Psyr_2186 0.26 +0.1 2,540,258 + Psyr_2186 0.26 +0.8 2,540,506 - Psyr_2186 0.54 -0.1 2,540,506 - Psyr_2186 0.54 +0.5 2,540,541 + Psyr_2186 0.58 +0.1 2,541,002 - -0.3 2,541,087 - -0.1 2,541,284 - Psyr_2187 0.22 +0.6 2,541,284 - Psyr_2187 0.22 -1.1 2,541,424 - Psyr_2187 0.33 -0.9 2,541,518 + Psyr_2187 0.40 -0.8 2,541,518 + Psyr_2187 0.40 +1.6 2,541,519 - Psyr_2187 0.40 +0.1 2,541,540 - Psyr_2187 0.41 +0.9 2,541,540 - Psyr_2187 0.41 -0.5 2,541,626 + Psyr_2187 0.48 -0.1 2,541,627 - Psyr_2187 0.48 +0.7 2,541,684 + Psyr_2187 0.52 -0.2 2,541,684 + Psyr_2187 0.52 -0.3 2,541,684 + Psyr_2187 0.52 -0.3 2,541,685 - Psyr_2187 0.52 -0.1 2,541,685 - Psyr_2187 0.52 +0.4 2,541,776 + Psyr_2187 0.59 -0.1 2,541,776 + Psyr_2187 0.59 -0.6 2,541,776 + Psyr_2187 0.59 -0.0 2,541,776 + Psyr_2187 0.59 +0.1 2,541,776 + Psyr_2187 0.59 -0.2 2,541,777 - Psyr_2187 0.59 -0.5 2,541,777 - Psyr_2187 0.59 +0.2 2,541,777 - Psyr_2187 0.59 -0.2 2,541,777 - Psyr_2187 0.59 -0.2 2,541,777 - Psyr_2187 0.59 -1.1 2,541,777 - Psyr_2187 0.59 +0.2 2,541,777 - Psyr_2187 0.59 -1.0 2,541,806 + Psyr_2187 0.61 -0.7 2,541,812 + Psyr_2187 0.62 +0.3 2,541,812 + Psyr_2187 0.62 -0.8 2,541,812 + Psyr_2187 0.62 +0.2 2,541,812 + Psyr_2187 0.62 -1.8 2,541,813 - Psyr_2187 0.62 -1.0 2,541,813 - Psyr_2187 0.62 -0.6 2,541,813 - Psyr_2187 0.62 -1.5 2,541,813 - Psyr_2187 0.62 -0.6 2,541,980 + Psyr_2187 0.75 +0.2 2,541,980 + Psyr_2187 0.75 +1.8 2,541,981 - Psyr_2187 0.75 -0.9 2,541,981 - Psyr_2187 0.75 -0.3 2,542,058 + Psyr_2187 0.80 -0.2 2,542,058 + Psyr_2187 0.80 +0.8 2,542,058 + Psyr_2187 0.80 -0.2 2,542,058 + Psyr_2187 0.80 -1.8 2,542,058 + Psyr_2187 0.80 +0.4 2,542,058 + Psyr_2187 0.80 +0.1 2,542,059 - Psyr_2187 0.81 +0.8 2,542,059 - Psyr_2187 0.81 +0.2 2,542,059 - Psyr_2187 0.81 -1.6 2,542,062 - Psyr_2187 0.81 -0.9 2,542,062 - Psyr_2187 0.81 -0.6 2,542,213 + +0.7 2,542,214 - +0.5 2,542,214 - -1.4 2,542,214 - +0.6 2,542,369 + +0.2 2,542,369 + +1.0 2,542,370 - -1.6 2,542,370 - +0.6 2,542,374 + -0.6 2,542,375 - -0.3 2,542,375 - -0.3 2,542,375 - +0.1 2,542,561 + -0.4 2,542,760 - +0.7 2,542,850 - -0.4 2,542,888 + -1.6 2,542,941 - -1.0 2,542,965 + +0.9 2,542,965 + +0.0 2,542,965 + +0.9 2,542,965 + -0.4 2,542,966 - +0.4 2,542,995 - +1.0 2,543,026 + +0.4 2,543,026 + +0.1 2,543,026 + -0.3 2,543,027 - +0.4 2,543,041 + -0.4 2,543,042 - -0.6 2,543,042 - -0.1 2,543,042 - -0.3 2,543,045 + +1.9 2,543,045 + +0.4 2,543,046 - +0.9 2,543,046 - -1.0 2,543,046 - -0.6 2,543,046 - -0.3
Or see this region's nucleotide sequence