Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1790

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
2,041,966	+		Psyr_1789	0.71	+1.3
2,041,966	+		Psyr_1789	0.71	-0.0
2,041,966	+		Psyr_1789	0.71	+0.7
2,041,967	-		Psyr_1789	0.71	+0.2
2,041,967	-		Psyr_1789	0.71	-1.9
2,041,967	-		Psyr_1789	0.71	-0.5
2,041,967	-		Psyr_1789	0.71	-0.5
2,041,967	-		Psyr_1789	0.71	+1.3
2,042,049	-		Psyr_1789	0.76	-0.6
2,042,161	+		Psyr_1789	0.83	+0.5
2,042,161	+		Psyr_1789	0.83	-1.9
2,042,161	+		Psyr_1789	0.83	-1.0
2,042,162	-		Psyr_1789	0.83	-0.7
2,042,162	-		Psyr_1789	0.83	+1.7
2,042,162	-		Psyr_1789	0.83	+1.8
2,042,162	-		Psyr_1789	0.83	+1.3
2,042,313	+				+0.5
2,042,484	-				+0.0
2,042,546	+				-2.9
2,042,546	+				-0.4
2,042,547	-				+1.5
2,042,547	-				+0.2
2,042,547	-				-0.1
2,042,550	+				+1.5
2,042,550	+				-2.1
2,042,551	-				-0.5
2,042,551	-				+0.8
2,042,551	-				-0.7
2,042,551	-				-0.7
2,042,551	-				-2.1
2,042,551	-				+0.1
2,042,568	+				-1.5
2,042,568	+				-0.9
2,042,568	+				+0.1
2,042,569	-				-0.7
2,042,569	-				+0.2
2,042,569	-				-0.1
2,042,569	-				+0.6
2,042,569	-				+0.5
2,042,569	-				-0.7
2,042,580	-				+1.3
2,042,592	+				+0.4
2,042,593	-				+1.0
2,042,593	-				+0.1
2,042,593	-				+0.5
2,042,601	+				+0.3
2,042,612	-				-0.5
2,042,741	+				+1.2
2,042,984	-		Psyr_1790	0.28	-1.3
2,043,081	+		Psyr_1790	0.37	-0.3
2,043,082	-		Psyr_1790	0.37	-0.4
2,043,082	-		Psyr_1790	0.37	-0.3
2,043,131	+		Psyr_1790	0.42	-0.6
2,043,131	+		Psyr_1790	0.42	-0.2
2,043,131	+		Psyr_1790	0.42	-0.5
2,043,132	-		Psyr_1790	0.42	-0.2
2,043,132	-		Psyr_1790	0.42	-0.1
2,043,203	-		Psyr_1790	0.49	-0.5
2,043,203	-		Psyr_1790	0.49	-0.4
2,043,203	-		Psyr_1790	0.49	+1.9
2,043,203	-		Psyr_1790	0.49	+2.0
2,043,203	-		Psyr_1790	0.49	-0.5
2,043,206	+		Psyr_1790	0.50	+0.6
2,043,206	+		Psyr_1790	0.50	-0.2
2,043,206	+		Psyr_1790	0.50	-1.2
2,043,206	+		Psyr_1790	0.50	-1.1
2,043,206	+		Psyr_1790	0.50	-0.8
2,043,206	+		Psyr_1790	0.50	-0.0
2,043,206	+		Psyr_1790	0.50	+1.2
2,043,206	+		Psyr_1790	0.50	-0.6
2,043,206	+		Psyr_1790	0.50	-0.8
2,043,206	+		Psyr_1790	0.50	+0.4
2,043,206	+		Psyr_1790	0.50	+0.5
2,043,206	+		Psyr_1790	0.50	+1.5
2,043,207	-		Psyr_1790	0.50	+0.3
2,043,207	-		Psyr_1790	0.50	+1.0
2,043,207	-		Psyr_1790	0.50	-0.7
2,043,207	-		Psyr_1790	0.50	-1.1
2,043,207	-		Psyr_1790	0.50	+1.3
2,043,207	-		Psyr_1790	0.50	+2.0
2,043,207	-		Psyr_1790	0.50	-3.5
2,043,207	-		Psyr_1790	0.50	+1.0
2,043,207	-		Psyr_1790	0.50	-0.7
2,043,207	-		Psyr_1790	0.50	+1.5
2,043,207	-		Psyr_1790	0.50	+0.1
2,043,207	-		Psyr_1790	0.50	-0.7
2,043,227	+		Psyr_1790	0.52	+0.6
2,043,228	-		Psyr_1790	0.52	-0.1
2,043,294	-		Psyr_1790	0.59	-0.6
2,043,326	+		Psyr_1790	0.62	+2.6
2,043,326	+		Psyr_1790	0.62	+0.2
2,043,326	+		Psyr_1790	0.62	+0.5
2,043,327	-		Psyr_1790	0.62	+0.0
2,043,327	-		Psyr_1790	0.62	+0.5
2,043,327	-		Psyr_1790	0.62	+0.6
2,043,327	-		Psyr_1790	0.62	-2.1
2,043,327	-		Psyr_1790	0.62	+0.2
2,043,492	+		Psyr_1790	0.79	-0.1
2,043,493	-		Psyr_1790	0.79	-0.5
2,043,513	+		Psyr_1790	0.81	+0.7
2,043,514	-		Psyr_1790	0.81	+0.5
2,043,514	-		Psyr_1790	0.81	+0.2
2,043,524	+		Psyr_1790	0.82	-0.1
2,043,528	+		Psyr_1790	0.82	-0.2
2,043,529	-		Psyr_1790	0.82	+0.2
2,043,529	-		Psyr_1790	0.82	-0.5
2,043,669	+				-0.4
2,043,694	+				+0.3
2,043,695	-				-0.9
2,043,695	-				-0.2
2,043,695	-				-0.8
2,043,695	-				+0.1
2,043,698	+				+0.5
2,043,699	-				-1.0
2,043,699	-				-0.1
2,043,755	+				-1.4
2,043,809	-				+0.5
2,043,828	+				-0.5
2,043,829	-				-0.8
2,043,881	-				+0.5
2,043,881	-				-0.5
2,043,901	+				+1.0
2,043,901	+				-0.1
2,043,901	+				+3.6
2,043,902	-				-1.1
2,044,338	+		Psyr_1791	0.66	-1.1
2,044,338	+		Psyr_1791	0.66	-1.5
2,044,338	+		Psyr_1791	0.66	-3.1
2,044,339	-		Psyr_1791	0.66	+0.2
2,044,339	-		Psyr_1791	0.66	-0.8
2,044,339	-		Psyr_1791	0.66	-1.1
2,044,339	-		Psyr_1791	0.66	-2.4
2,044,340	+		Psyr_1791	0.66	+0.0
2,044,359	+		Psyr_1791	0.69	+0.3
2,044,360	-		Psyr_1791	0.69	-1.3