Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0546 and Psyr_0547 are separated by 177 nucleotides Psyr_0547 and Psyr_0548 overlap by 10 nucleotides Psyr_0548 and Psyr_0549 are separated by 145 nucleotides
Psyr_0546: Psyr_0546 - lipoprotein, putative, at 618,752 to 619,498
_0546
Psyr_0547: Psyr_0547 - Conserved hypothetical protein 52, at 619,676 to 620,323
_0547
Psyr_0548: Psyr_0548 - Protein of unknown function DUF1249, at 620,314 to 620,766
_0548
Psyr_0549: Psyr_0549 - Metallophosphoesterase, at 620,912 to 621,718
_0549
Position (kb) 620
621 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.537 kb on + strand at 619.538 kb on - strand at 619.538 kb on - strand at 619.538 kb on - strand at 619.538 kb on - strand at 619.538 kb on - strand at 619.538 kb on - strand at 619.541 kb on + strand at 619.541 kb on + strand at 619.541 kb on + strand at 619.541 kb on + strand at 619.541 kb on + strand at 619.541 kb on + strand at 619.541 kb on + strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.561 kb on + strand at 619.562 kb on - strand at 619.562 kb on - strand at 619.594 kb on - strand at 619.620 kb on - strand at 619.620 kb on - strand at 619.664 kb on + strand at 619.750 kb on - strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.778 kb on + strand, within Psyr_0547 at 619.779 kb on - strand, within Psyr_0547 at 619.779 kb on - strand, within Psyr_0547 at 619.779 kb on - strand, within Psyr_0547 at 619.779 kb on - strand, within Psyr_0547 at 619.779 kb on - strand, within Psyr_0547 at 619.779 kb on - strand, within Psyr_0547 at 619.779 kb on - strand, within Psyr_0547 at 619.780 kb on + strand, within Psyr_0547 at 619.780 kb on + strand, within Psyr_0547 at 619.780 kb on + strand, within Psyr_0547 at 619.781 kb on - strand, within Psyr_0547 at 619.781 kb on - strand, within Psyr_0547 at 619.781 kb on - strand, within Psyr_0547 at 619.781 kb on - strand, within Psyr_0547 at 619.781 kb on - strand, within Psyr_0547 at 619.886 kb on + strand, within Psyr_0547 at 620.081 kb on + strand, within Psyr_0547 at 620.081 kb on + strand, within Psyr_0547 at 620.081 kb on + strand, within Psyr_0547 at 620.081 kb on + strand, within Psyr_0547 at 620.081 kb on + strand, within Psyr_0547 at 620.081 kb on + strand, within Psyr_0547 at 620.081 kb on + strand, within Psyr_0547 at 620.082 kb on - strand, within Psyr_0547 at 620.082 kb on - strand, within Psyr_0547 at 620.082 kb on - strand, within Psyr_0547 at 620.082 kb on - strand, within Psyr_0547 at 620.082 kb on - strand, within Psyr_0547 at 620.082 kb on - strand, within Psyr_0547 at 620.082 kb on - strand, within Psyr_0547 at 620.082 kb on - strand, within Psyr_0547 at 620.082 kb on - strand, within Psyr_0547 at 620.313 kb on + strand at 620.314 kb on - strand at 620.314 kb on - strand at 620.327 kb on + strand at 620.328 kb on - strand at 620.328 kb on - strand at 620.328 kb on - strand at 620.387 kb on - strand, within Psyr_0548 at 620.478 kb on - strand, within Psyr_0548 at 620.510 kb on - strand, within Psyr_0548 at 620.584 kb on + strand, within Psyr_0548 at 620.584 kb on + strand, within Psyr_0548 at 620.584 kb on + strand, within Psyr_0548 at 620.584 kb on + strand, within Psyr_0548 at 620.584 kb on + strand, within Psyr_0548 at 620.584 kb on + strand, within Psyr_0548 at 620.585 kb on - strand, within Psyr_0548 at 620.647 kb on + strand, within Psyr_0548 at 620.647 kb on + strand, within Psyr_0548 at 620.647 kb on + strand, within Psyr_0548 at 620.647 kb on + strand, within Psyr_0548 at 620.648 kb on - strand, within Psyr_0548 at 620.648 kb on - strand, within Psyr_0548 at 620.648 kb on - strand, within Psyr_0548 at 621.117 kb on - strand, within Psyr_0549 at 621.448 kb on - strand, within Psyr_0549 at 621.486 kb on + strand, within Psyr_0549 at 621.733 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 619,537 + +0.4 619,537 + +0.2 619,537 + -0.8 619,537 + -0.2 619,537 + +0.3 619,537 + +0.9 619,537 + +0.2 619,537 + +0.4 619,537 + +0.1 619,537 + +1.9 619,537 + -0.1 619,537 + +0.0 619,538 - -0.4 619,538 - -0.3 619,538 - -0.1 619,538 - +1.0 619,538 - -1.2 619,538 - +2.8 619,541 + +1.2 619,541 + -0.7 619,541 + -1.1 619,541 + -1.5 619,541 + -0.7 619,541 + +0.1 619,541 + -0.7 619,542 - -0.1 619,542 - +2.4 619,542 - -1.6 619,542 - +1.8 619,542 - +0.0 619,542 - -0.2 619,542 - +0.8 619,542 - +0.2 619,542 - -0.3 619,561 + -2.2 619,562 - +1.8 619,562 - +0.2 619,594 - -0.0 619,620 - +1.1 619,620 - +0.6 619,664 + -0.6 619,750 - Psyr_0547 0.11 -0.3 619,778 + Psyr_0547 0.16 -1.2 619,778 + Psyr_0547 0.16 +1.3 619,778 + Psyr_0547 0.16 +0.4 619,778 + Psyr_0547 0.16 +0.6 619,778 + Psyr_0547 0.16 +0.1 619,778 + Psyr_0547 0.16 +2.4 619,778 + Psyr_0547 0.16 -0.3 619,778 + Psyr_0547 0.16 +0.4 619,778 + Psyr_0547 0.16 -0.2 619,778 + Psyr_0547 0.16 -1.2 619,778 + Psyr_0547 0.16 +0.4 619,779 - Psyr_0547 0.16 +0.2 619,779 - Psyr_0547 0.16 -0.3 619,779 - Psyr_0547 0.16 +1.6 619,779 - Psyr_0547 0.16 -0.4 619,779 - Psyr_0547 0.16 +0.6 619,779 - Psyr_0547 0.16 +0.8 619,779 - Psyr_0547 0.16 -1.0 619,780 + Psyr_0547 0.16 -0.9 619,780 + Psyr_0547 0.16 -1.6 619,780 + Psyr_0547 0.16 +0.2 619,781 - Psyr_0547 0.16 +0.4 619,781 - Psyr_0547 0.16 -0.2 619,781 - Psyr_0547 0.16 +0.2 619,781 - Psyr_0547 0.16 +1.2 619,781 - Psyr_0547 0.16 -0.7 619,886 + Psyr_0547 0.32 +0.4 620,081 + Psyr_0547 0.62 -1.4 620,081 + Psyr_0547 0.62 -0.4 620,081 + Psyr_0547 0.62 +0.3 620,081 + Psyr_0547 0.62 +0.2 620,081 + Psyr_0547 0.62 -0.2 620,081 + Psyr_0547 0.62 -0.4 620,081 + Psyr_0547 0.62 -0.5 620,082 - Psyr_0547 0.63 -1.0 620,082 - Psyr_0547 0.63 -2.0 620,082 - Psyr_0547 0.63 +1.3 620,082 - Psyr_0547 0.63 -0.4 620,082 - Psyr_0547 0.63 +0.1 620,082 - Psyr_0547 0.63 +0.1 620,082 - Psyr_0547 0.63 -0.2 620,082 - Psyr_0547 0.63 -0.6 620,082 - Psyr_0547 0.63 +1.5 620,313 + -0.4 620,314 - -0.7 620,314 - +0.1 620,327 + +1.2 620,328 - +0.9 620,328 - -1.5 620,328 - -0.0 620,387 - Psyr_0548 0.16 -0.5 620,478 - Psyr_0548 0.36 -1.0 620,510 - Psyr_0548 0.43 -0.2 620,584 + Psyr_0548 0.60 -0.6 620,584 + Psyr_0548 0.60 -0.9 620,584 + Psyr_0548 0.60 -0.4 620,584 + Psyr_0548 0.60 -0.7 620,584 + Psyr_0548 0.60 -0.4 620,584 + Psyr_0548 0.60 -0.1 620,585 - Psyr_0548 0.60 -0.4 620,647 + Psyr_0548 0.74 -1.2 620,647 + Psyr_0548 0.74 +0.3 620,647 + Psyr_0548 0.74 +1.5 620,647 + Psyr_0548 0.74 -1.5 620,648 - Psyr_0548 0.74 -0.1 620,648 - Psyr_0548 0.74 -0.2 620,648 - Psyr_0548 0.74 +0.3 621,117 - Psyr_0549 0.25 -2.4 621,448 - Psyr_0549 0.66 -0.9 621,486 + Psyr_0549 0.71 +0.3 621,733 - +0.0
Or see this region's nucleotide sequence