Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3214

Experiment: m.b. Chlorite 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chlorite 0.5 mM
3,380,533	+		Dshi_3213	0.56	+0.0
3,380,556	+		Dshi_3213	0.58	+0.3
3,380,580	-		Dshi_3213	0.60	-0.0
3,380,604	+		Dshi_3213	0.63	-0.5
3,380,637	+		Dshi_3213	0.65	+0.2
3,380,645	-		Dshi_3213	0.66	+0.5
3,380,647	-		Dshi_3213	0.66	+0.6
3,380,651	-		Dshi_3213	0.67	-0.4
3,380,652	+		Dshi_3213	0.67	+0.9
3,380,699	+		Dshi_3213	0.71	+0.9
3,380,724	-		Dshi_3213	0.73	-0.4
3,380,779	+		Dshi_3213	0.78	+0.7
3,380,795	+		Dshi_3213	0.79	+0.3
3,380,814	-		Dshi_3213	0.81	-0.0
3,380,819	-		Dshi_3213	0.81	+1.2
3,380,837	-		Dshi_3213	0.83	+0.2
3,380,887	+		Dshi_3213	0.87	-0.9
3,380,894	+		Dshi_3213	0.87	-1.0
3,380,897	+		Dshi_3213	0.88	-0.7
3,380,900	-		Dshi_3213	0.88	-0.4
3,380,905	-		Dshi_3213	0.88	+0.9
3,380,906	-		Dshi_3213	0.88	-1.1
3,380,915	+		Dshi_3213	0.89	+1.7
3,380,919	+		Dshi_3213	0.90	-0.7
3,380,925	+				+0.6
3,380,935	+				-0.3
3,380,943	-				+0.7
3,380,943	-				+1.6
3,380,949	-				-1.8
3,380,956	+				-0.6
3,380,956	+				-0.2
3,380,959	-				+0.0
3,380,964	-				-0.9
3,380,982	-				+0.3
3,380,982	-				+1.8
3,381,009	+				+0.4
3,381,017	-				+0.4
3,381,084	-				-0.2
3,381,101	-				+0.9
3,381,115	+				-0.6
3,381,118	-				+0.4
3,381,127	+				-0.3
3,381,128	-				-0.1
3,381,128	-				+0.5
3,381,137	-				-2.1
3,381,138	-				-0.7
3,381,153	+				+0.4
3,381,161	-				+0.0
3,381,163	+				+0.1
3,381,206	+				-0.1
3,381,206	+				+0.5
3,381,214	-				-0.1
3,381,216	+				+0.9
3,381,229	-				+0.2
3,381,258	+				+0.3
3,381,263	-				+1.0
3,381,264	+				+0.6
3,381,265	+				-0.4
3,381,275	+				+0.2
3,381,397	+				+1.3
3,381,397	-				-0.1
3,381,399	+				-0.2
3,381,399	+				+0.4
3,381,405	-				-0.7
3,381,405	-				-0.1
3,381,405	-				+0.7
3,381,405	-				+0.1
3,381,405	-				-1.1
3,381,405	-				+0.5
3,381,405	-				+0.1
3,381,405	-				-0.6
3,381,405	-				-1.7
3,381,407	-				+0.6
3,381,419	-				+0.3
3,381,422	+				-0.2
3,381,442	-				+0.8
3,381,442	-				-0.9
3,381,446	+				+1.5
3,381,446	+				-0.4
3,381,454	-				+1.3
3,381,454	-				-0.5
3,381,454	-				-0.5
3,381,455	+				+0.1
3,381,463	-				+0.1
3,381,472	+				+0.0
3,381,489	-				-0.7
3,381,498	+				-1.4
3,381,498	+				+0.2
3,381,498	+				-0.5
3,381,498	+				-1.1
3,381,499	-				-1.5
3,381,506	-				-0.9
3,381,506	-				-0.7
3,381,506	-				-0.3
3,381,506	-				+0.6
3,381,506	-				-0.5
3,381,506	-				+0.3
3,381,506	-				+0.8
3,381,506	-				+0.5
3,381,506	-				-0.3
3,381,506	-				-0.1
3,381,531	-				+0.1
3,381,532	-				-1.7
3,381,532	-				+0.3
3,381,555	+				+0.1
3,381,565	+				-0.1
3,381,570	+				-1.1
3,381,570	+				-0.3
3,381,570	+				+0.6
3,381,570	+				+0.7
3,381,573	-				+0.1
3,381,573	-				+0.1
3,381,578	-				-0.5
3,381,578	-				+0.2
3,381,578	-				-0.7
3,381,602	+				+0.2
3,381,627	+				-0.5
3,381,635	-				+0.9
3,381,635	-				+1.0
3,381,653	+				+0.9
3,381,653	+				+0.1
3,381,661	-				+0.3
3,381,663	+				-0.0
3,381,671	-				+0.6
3,381,673	+				-0.5
3,381,673	+				+0.3
3,381,673	+				+1.9
3,381,681	-				+0.2
3,381,681	-				+0.2
3,381,736	-				+1.2
3,381,774	+				-1.6
3,381,777	-				+0.4
3,381,777	-				+1.4
3,381,791	-		Dshi_3214	0.10	-0.0
3,381,822	+		Dshi_3214	0.11	+0.9
3,381,906	-		Dshi_3214	0.15	+0.5
3,381,911	-		Dshi_3214	0.15	-0.4
3,381,927	-		Dshi_3214	0.15	-0.8
3,381,934	-		Dshi_3214	0.16	-1.1
3,381,948	+		Dshi_3214	0.16	-0.1
3,381,959	+		Dshi_3214	0.17	-0.1
3,381,963	-		Dshi_3214	0.17	+1.5
3,381,993	+		Dshi_3214	0.18	-0.8
3,381,993	+		Dshi_3214	0.18	+0.1
3,382,014	+		Dshi_3214	0.19	+0.4
3,382,014	+		Dshi_3214	0.19	-1.1
3,382,022	-		Dshi_3214	0.19	-0.8
3,382,029	+		Dshi_3214	0.19	+0.3
3,382,029	+		Dshi_3214	0.19	-1.3
3,382,034	+		Dshi_3214	0.20	-0.1
3,382,037	-		Dshi_3214	0.20	-1.5
3,382,090	+		Dshi_3214	0.22	-0.1
3,382,166	+		Dshi_3214	0.25	-1.5
3,382,233	+		Dshi_3214	0.27	+0.2
3,382,234	-		Dshi_3214	0.27	+0.0
3,382,286	-		Dshi_3214	0.29	-0.1
3,382,289	+		Dshi_3214	0.29	-0.4
3,382,324	+		Dshi_3214	0.31	-1.2
3,382,324	+		Dshi_3214	0.31	-0.2
3,382,332	-		Dshi_3214	0.31	-0.5
3,382,332	-		Dshi_3214	0.31	-0.7
3,382,333	-		Dshi_3214	0.31	-1.8
3,382,343	-		Dshi_3214	0.32	+3.0
3,382,346	+		Dshi_3214	0.32	+0.6
3,382,395	-		Dshi_3214	0.34	+2.2
3,382,504	+		Dshi_3214	0.38	-0.8
3,382,504	+		Dshi_3214	0.38	-0.6
3,382,523	+		Dshi_3214	0.39	+0.8
3,382,530	-		Dshi_3214	0.39	+0.0
3,382,563	+		Dshi_3214	0.40	+0.1
3,382,577	+		Dshi_3214	0.41	+0.5
3,382,582	+		Dshi_3214	0.41	-0.3
3,382,752	-		Dshi_3214	0.47	-0.3
3,382,755	-		Dshi_3214	0.48	+0.7
3,382,775	+		Dshi_3214	0.48	-0.7
3,382,776	-		Dshi_3214	0.48	+0.0
3,382,776	-		Dshi_3214	0.48	+0.0
3,382,835	-		Dshi_3214	0.51	+1.5
3,382,862	+		Dshi_3214	0.52	+0.0
3,382,863	-		Dshi_3214	0.52	-0.6
3,382,885	+		Dshi_3214	0.53	+0.2
3,382,885	+		Dshi_3214	0.53	+0.9
3,382,928	+		Dshi_3214	0.54	-0.7
3,382,986	+		Dshi_3214	0.56	+0.1
3,383,084	-		Dshi_3214	0.60	-0.5
3,383,117	+		Dshi_3214	0.62	+0.6
3,383,122	+		Dshi_3214	0.62	+0.0
3,383,130	-		Dshi_3214	0.62	+0.2
3,383,192	+		Dshi_3214	0.64	+0.5
3,383,193	+		Dshi_3214	0.65	+0.1
3,383,200	-		Dshi_3214	0.65	+0.3
3,383,305	-		Dshi_3214	0.69	+0.4
3,383,329	-		Dshi_3214	0.70	+0.3
3,383,336	-		Dshi_3214	0.70	-1.2
3,383,482	-		Dshi_3214	0.76	+0.5
3,383,498	+		Dshi_3214	0.76	+0.7
3,383,550	-		Dshi_3214	0.78	-1.1
3,383,595	-		Dshi_3214	0.80	-0.5
3,383,684	-		Dshi_3214	0.84	+0.5
3,383,782	-		Dshi_3214	0.87	-0.5
3,383,794	+		Dshi_3214	0.88	-0.0
3,383,797	-		Dshi_3214	0.88	+0.4
3,383,823	+		Dshi_3214	0.89	-0.6
3,383,831	-		Dshi_3214	0.89	-0.1
3,383,834	+		Dshi_3214	0.89	-0.6
3,383,842	-		Dshi_3214	0.90	-0.6
3,383,977	+				-0.4
3,383,983	-				-0.1
3,383,985	-				+0.1
3,383,994	+				+2.7
3,384,039	+				+1.2
3,384,044	+				+0.1
3,384,084	-				-0.2
3,384,088	+				-1.9
3,384,098	-				-0.1
3,384,120	-				+0.1
3,384,120	-				+0.7
3,384,155	+				-0.1
3,384,160	+				-0.5
3,384,168	-				-0.8
3,384,191	-				+0.4
3,384,191	-				-0.7
3,384,196	+				+1.5
3,384,337	-				-1.5
3,384,365	+				-0.6
3,384,370	-				+0.3
3,384,370	-				+0.6
3,384,370	-				-0.4
3,384,450	-		Dshi_3215	0.11	-0.1
3,384,461	-		Dshi_3215	0.12	+1.1
3,384,461	-		Dshi_3215	0.12	+0.2
3,384,485	-		Dshi_3215	0.14	-1.8
3,384,568	+		Dshi_3215	0.19	-2.1
3,384,635	+		Dshi_3215	0.24	+0.5
3,384,653	-		Dshi_3215	0.25	-0.5
3,384,655	+		Dshi_3215	0.25	+0.5
3,384,706	+		Dshi_3215	0.28	-0.1
3,384,744	+		Dshi_3215	0.31	+1.0
3,384,745	-		Dshi_3215	0.31	-0.5
3,384,747	-		Dshi_3215	0.31	+0.5
3,384,749	+		Dshi_3215	0.31	+0.5
3,384,754	-		Dshi_3215	0.31	-0.3
3,384,872	+		Dshi_3215	0.39	-0.1
3,384,883	+		Dshi_3215	0.40	-0.5
3,384,939	-		Dshi_3215	0.44	+1.0
3,384,939	-		Dshi_3215	0.44	-1.2
3,384,948	+		Dshi_3215	0.44	+0.4
3,384,948	+		Dshi_3215	0.44	+0.4
3,384,953	+		Dshi_3215	0.44	-0.9
3,384,953	+		Dshi_3215	0.44	+0.6
3,384,953	+		Dshi_3215	0.44	+0.4
3,384,953	+		Dshi_3215	0.44	+0.5
3,384,953	+		Dshi_3215	0.44	-0.1
3,384,953	+		Dshi_3215	0.44	+0.3
3,384,961	-		Dshi_3215	0.45	+0.2
3,385,006	-		Dshi_3215	0.48	-0.7