Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS12020

Experiment: R2A with sodium bromide 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with sodium bromide 250 mM
2,663,328	+		LRK54_RS12015	0.34	-1.2
2,663,328	+		LRK54_RS12015	0.34	-1.7
2,663,328	+		LRK54_RS12015	0.34	-1.2
2,663,328	+		LRK54_RS12015	0.34	-1.8
2,663,328	+		LRK54_RS12015	0.34	+1.2
2,663,328	+		LRK54_RS12015	0.34	+0.1
2,663,328	+		LRK54_RS12015	0.34	-1.8
2,663,328	+		LRK54_RS12015	0.34	-1.5
2,663,329	-		LRK54_RS12015	0.34	-1.3
2,663,329	-		LRK54_RS12015	0.34	-1.7
2,663,329	-		LRK54_RS12015	0.34	-4.1
2,663,329	-		LRK54_RS12015	0.34	-2.9
2,663,329	-		LRK54_RS12015	0.34	-1.8
2,663,329	-		LRK54_RS12015	0.34	-2.3
2,663,329	-		LRK54_RS12015	0.34	-3.2
2,663,329	-		LRK54_RS12015	0.34	-2.9
2,663,329	-		LRK54_RS12015	0.34	-4.0
2,663,507	+		LRK54_RS12015	0.48	-2.1
2,663,507	+		LRK54_RS12015	0.48	-0.9
2,663,507	+		LRK54_RS12015	0.48	-2.2
2,663,507	+		LRK54_RS12015	0.48	+0.1
2,663,507	+		LRK54_RS12015	0.48	-3.4
2,663,507	+		LRK54_RS12015	0.48	-2.3
2,663,507	+		LRK54_RS12015	0.48	-0.9
2,663,508	-		LRK54_RS12015	0.48	-3.9
2,663,508	-		LRK54_RS12015	0.48	-0.2
2,663,508	-		LRK54_RS12015	0.48	-1.3
2,663,508	-		LRK54_RS12015	0.48	-1.3
2,663,508	-		LRK54_RS12015	0.48	-2.9
2,663,924	+		LRK54_RS12015	0.80	-2.8
2,663,924	+		LRK54_RS12015	0.80	-2.5
2,663,924	+		LRK54_RS12015	0.80	-2.3
2,663,924	+		LRK54_RS12015	0.80	-3.8
2,663,924	+		LRK54_RS12015	0.80	-1.7
2,663,924	+		LRK54_RS12015	0.80	-0.9
2,663,924	+		LRK54_RS12015	0.80	-1.2
2,663,924	+		LRK54_RS12015	0.80	-2.9
2,663,924	+		LRK54_RS12015	0.80	-2.0
2,663,924	+		LRK54_RS12015	0.80	-2.3
2,663,924	+		LRK54_RS12015	0.80	-2.3
2,663,924	+		LRK54_RS12015	0.80	-2.2
2,663,924	+		LRK54_RS12015	0.80	-1.7
2,663,924	+		LRK54_RS12015	0.80	-2.3
2,663,924	+		LRK54_RS12015	0.80	-2.0
2,663,924	+		LRK54_RS12015	0.80	-1.5
2,663,924	+		LRK54_RS12015	0.80	-3.2
2,663,924	+		LRK54_RS12015	0.80	-3.8
2,663,924	+		LRK54_RS12015	0.80	-2.0
2,663,925	-		LRK54_RS12015	0.80	-1.7
2,663,925	-		LRK54_RS12015	0.80	-3.2
2,663,925	-		LRK54_RS12015	0.80	-0.3
2,663,925	-		LRK54_RS12015	0.80	-2.3
2,663,925	-		LRK54_RS12015	0.80	-1.5
2,663,925	-		LRK54_RS12015	0.80	-2.8
2,663,925	-		LRK54_RS12015	0.80	-3.6
2,663,925	-		LRK54_RS12015	0.80	-1.5
2,663,925	-		LRK54_RS12015	0.80	-2.6
2,663,925	-		LRK54_RS12015	0.80	-1.9
2,663,925	-		LRK54_RS12015	0.80	-0.3
2,663,925	-		LRK54_RS12015	0.80	-2.3
2,663,925	-		LRK54_RS12015	0.80	-2.7
2,663,925	-		LRK54_RS12015	0.80	-2.4
2,663,925	-		LRK54_RS12015	0.80	-2.2
2,663,925	-		LRK54_RS12015	0.80	-3.7
2,663,925	-		LRK54_RS12015	0.80	-3.4
2,663,925	-		LRK54_RS12015	0.80	-2.5
2,663,925	-		LRK54_RS12015	0.80	-1.8
2,663,925	-		LRK54_RS12015	0.80	-1.3
2,663,925	-		LRK54_RS12015	0.80	-1.2
2,663,925	-		LRK54_RS12015	0.80	-1.4
2,663,925	-		LRK54_RS12015	0.80	-1.0
2,664,107	+				-3.1
2,664,107	+				-4.4
2,664,108	-				-1.8
2,664,108	-				-0.3
2,664,108	-				-1.5
2,664,470	+		LRK54_RS12020	0.20	-1.6
2,664,470	+		LRK54_RS12020	0.20	+1.1
2,664,470	+		LRK54_RS12020	0.20	+0.4
2,664,470	+		LRK54_RS12020	0.20	-1.0
2,664,470	+		LRK54_RS12020	0.20	-2.7
2,664,470	+		LRK54_RS12020	0.20	-1.1
2,664,471	-		LRK54_RS12020	0.20	+1.2
2,664,471	-		LRK54_RS12020	0.20	+0.3
2,664,471	-		LRK54_RS12020	0.20	+0.7
2,664,471	-		LRK54_RS12020	0.20	+0.7
2,664,471	-		LRK54_RS12020	0.20	+1.7
2,664,471	-		LRK54_RS12020	0.20	+2.0
2,664,471	-		LRK54_RS12020	0.20	-0.7
2,664,471	-		LRK54_RS12020	0.20	-0.7
2,664,471	-		LRK54_RS12020	0.20	-0.7
2,664,476	+		LRK54_RS12020	0.20	-1.2
2,664,476	+		LRK54_RS12020	0.20	+0.7
2,664,476	+		LRK54_RS12020	0.20	-1.4
2,664,476	+		LRK54_RS12020	0.20	-1.3
2,664,476	+		LRK54_RS12020	0.20	+1.2
2,664,476	+		LRK54_RS12020	0.20	-1.3
2,664,476	+		LRK54_RS12020	0.20	-1.2
2,664,476	+		LRK54_RS12020	0.20	-1.3
2,664,476	+		LRK54_RS12020	0.20	-0.3
2,664,477	-		LRK54_RS12020	0.20	+1.7
2,664,477	-		LRK54_RS12020	0.20	-0.9
2,664,477	-		LRK54_RS12020	0.20	-1.5
2,664,477	-		LRK54_RS12020	0.20	-0.7
2,664,477	-		LRK54_RS12020	0.20	-2.1
2,664,477	-		LRK54_RS12020	0.20	-0.4
2,664,477	-		LRK54_RS12020	0.20	-0.7
2,664,477	-		LRK54_RS12020	0.20	-1.3
2,664,477	-		LRK54_RS12020	0.20	-1.3
2,664,719	+		LRK54_RS12020	0.47	+0.2
2,664,719	+		LRK54_RS12020	0.47	-1.5
2,664,719	+		LRK54_RS12020	0.47	-1.1
2,664,719	+		LRK54_RS12020	0.47	-0.3
2,664,719	+		LRK54_RS12020	0.47	-0.5
2,664,719	+		LRK54_RS12020	0.47	-0.4
2,664,719	+		LRK54_RS12020	0.47	+0.1
2,664,719	+		LRK54_RS12020	0.47	-0.3
2,664,719	+		LRK54_RS12020	0.47	-0.8
2,664,719	+		LRK54_RS12020	0.47	-0.3
2,664,719	+		LRK54_RS12020	0.47	-0.6
2,664,719	+		LRK54_RS12020	0.47	-0.3
2,664,719	+		LRK54_RS12020	0.47	-1.3
2,664,719	+		LRK54_RS12020	0.47	-2.2
2,664,719	+		LRK54_RS12020	0.47	-0.6
2,664,719	+		LRK54_RS12020	0.47	-0.5
2,664,719	+		LRK54_RS12020	0.47	+0.3
2,664,719	+		LRK54_RS12020	0.47	-0.3
2,664,719	+		LRK54_RS12020	0.47	+0.8
2,664,719	+		LRK54_RS12020	0.47	-0.2
2,664,719	+		LRK54_RS12020	0.47	-1.0
2,664,719	+		LRK54_RS12020	0.47	-0.8
2,664,720	-		LRK54_RS12020	0.47	-1.3
2,664,720	-		LRK54_RS12020	0.47	-0.4
2,664,720	-		LRK54_RS12020	0.47	-1.3
2,664,720	-		LRK54_RS12020	0.47	+0.7
2,664,720	-		LRK54_RS12020	0.47	-1.8
2,664,720	-		LRK54_RS12020	0.47	-0.3
2,664,720	-		LRK54_RS12020	0.47	+0.3
2,664,720	-		LRK54_RS12020	0.47	-1.3
2,664,720	-		LRK54_RS12020	0.47	-0.5
2,664,720	-		LRK54_RS12020	0.47	-0.9
2,664,720	-		LRK54_RS12020	0.47	-1.5
2,664,720	-		LRK54_RS12020	0.47	-0.3
2,664,720	-		LRK54_RS12020	0.47	+1.5
2,664,720	-		LRK54_RS12020	0.47	+0.1
2,664,720	-		LRK54_RS12020	0.47	-1.2
2,664,824	+		LRK54_RS12020	0.58	+0.1
2,664,824	+		LRK54_RS12020	0.58	-0.7
2,664,824	+		LRK54_RS12020	0.58	-0.9
2,664,824	+		LRK54_RS12020	0.58	-0.9
2,664,825	-		LRK54_RS12020	0.58	-2.4
2,664,825	-		LRK54_RS12020	0.58	+0.2
2,664,825	-		LRK54_RS12020	0.58	-0.7
2,664,825	-		LRK54_RS12020	0.58	-0.3
2,664,825	-		LRK54_RS12020	0.58	+0.7
2,664,825	-		LRK54_RS12020	0.58	+0.3
2,664,825	-		LRK54_RS12020	0.58	-0.2
2,664,825	-		LRK54_RS12020	0.58	+1.3
2,664,825	-		LRK54_RS12020	0.58	-0.0
2,664,825	-		LRK54_RS12020	0.58	-0.8
2,664,825	-		LRK54_RS12020	0.58	+0.3
2,664,825	-		LRK54_RS12020	0.58	-0.3
2,664,920	+		LRK54_RS12020	0.69	-1.1
2,664,920	+		LRK54_RS12020	0.69	-2.4
2,664,920	+		LRK54_RS12020	0.69	-0.2
2,664,920	+		LRK54_RS12020	0.69	-0.7
2,664,920	+		LRK54_RS12020	0.69	-0.3
2,664,920	+		LRK54_RS12020	0.69	+0.1
2,664,920	+		LRK54_RS12020	0.69	-0.8
2,664,920	+		LRK54_RS12020	0.69	-1.2
2,664,920	+		LRK54_RS12020	0.69	-0.1
2,664,920	+		LRK54_RS12020	0.69	-2.2
2,664,920	+		LRK54_RS12020	0.69	-0.7
2,664,921	-		LRK54_RS12020	0.69	-1.8
2,664,921	-		LRK54_RS12020	0.69	+0.5
2,664,921	-		LRK54_RS12020	0.69	-1.8
2,664,921	-		LRK54_RS12020	0.69	-1.5
2,664,921	-		LRK54_RS12020	0.69	-0.9
2,664,921	-		LRK54_RS12020	0.69	-2.2
2,664,921	-		LRK54_RS12020	0.69	-0.6
2,664,921	-		LRK54_RS12020	0.69	-2.5
2,664,986	+		LRK54_RS12020	0.76	-1.5
2,664,986	+		LRK54_RS12020	0.76	-0.3
2,664,987	-		LRK54_RS12020	0.76	-0.6
2,664,987	-		LRK54_RS12020	0.76	-0.0
2,664,987	-		LRK54_RS12020	0.76	-1.2
2,664,987	-		LRK54_RS12020	0.76	-1.6
2,664,987	-		LRK54_RS12020	0.76	-0.3
2,664,987	-		LRK54_RS12020	0.76	-0.6
2,664,987	-		LRK54_RS12020	0.76	+1.1
2,665,004	+		LRK54_RS12020	0.78	-2.9
2,665,004	+		LRK54_RS12020	0.78	+0.7
2,665,004	+		LRK54_RS12020	0.78	-1.0
2,665,004	+		LRK54_RS12020	0.78	+0.1
2,665,004	+		LRK54_RS12020	0.78	-0.8
2,665,004	+		LRK54_RS12020	0.78	-1.3
2,665,004	+		LRK54_RS12020	0.78	-0.3
2,665,004	+		LRK54_RS12020	0.78	-1.3
2,665,004	+		LRK54_RS12020	0.78	-1.0
2,665,004	+		LRK54_RS12020	0.78	+0.3
2,665,004	+		LRK54_RS12020	0.78	-0.2
2,665,004	+		LRK54_RS12020	0.78	-1.2
2,665,005	-		LRK54_RS12020	0.78	-2.0
2,665,005	-		LRK54_RS12020	0.78	-1.5
2,665,005	-		LRK54_RS12020	0.78	-0.9
2,665,005	-		LRK54_RS12020	0.78	-2.4
2,665,005	-		LRK54_RS12020	0.78	-1.0
2,665,005	-		LRK54_RS12020	0.78	-0.8
2,665,005	-		LRK54_RS12020	0.78	-1.1
2,665,005	-		LRK54_RS12020	0.78	-1.7
2,665,005	-		LRK54_RS12020	0.78	+0.8
2,665,005	-		LRK54_RS12020	0.78	+1.2
2,665,005	-		LRK54_RS12020	0.78	-2.1
2,665,005	-		LRK54_RS12020	0.78	-2.1
2,665,005	-		LRK54_RS12020	0.78	+0.8
2,665,022	+		LRK54_RS12020	0.80	-0.3
2,665,022	+		LRK54_RS12020	0.80	-0.3
2,665,022	+		LRK54_RS12020	0.80	-2.0
2,665,022	+		LRK54_RS12020	0.80	-0.8
2,665,022	+		LRK54_RS12020	0.80	+0.6
2,665,022	+		LRK54_RS12020	0.80	-2.5
2,665,022	+		LRK54_RS12020	0.80	-1.2
2,665,022	+		LRK54_RS12020	0.80	+2.5
2,665,022	+		LRK54_RS12020	0.80	+0.1
2,665,022	+		LRK54_RS12020	0.80	-1.8
2,665,022	+		LRK54_RS12020	0.80	-1.0
2,665,022	+		LRK54_RS12020	0.80	+1.7
2,665,022	+		LRK54_RS12020	0.80	+0.1
2,665,022	+		LRK54_RS12020	0.80	+0.3
2,665,022	+		LRK54_RS12020	0.80	-1.2
2,665,022	+		LRK54_RS12020	0.80	-1.8
2,665,022	+		LRK54_RS12020	0.80	-0.7
2,665,022	+		LRK54_RS12020	0.80	+0.3
2,665,022	+		LRK54_RS12020	0.80	-0.7
2,665,022	+		LRK54_RS12020	0.80	+0.4
2,665,022	+		LRK54_RS12020	0.80	-1.4
2,665,022	+		LRK54_RS12020	0.80	-3.2
2,665,022	+		LRK54_RS12020	0.80	-1.2
2,665,022	+		LRK54_RS12020	0.80	+1.9
2,665,022	+		LRK54_RS12020	0.80	-1.2
2,665,022	+		LRK54_RS12020	0.80	-1.7
2,665,022	+		LRK54_RS12020	0.80	+0.4
2,665,022	+		LRK54_RS12020	0.80	-2.1
2,665,022	+		LRK54_RS12020	0.80	+0.2
2,665,022	+		LRK54_RS12020	0.80	-0.3
2,665,022	+		LRK54_RS12020	0.80	+0.7
2,665,022	+		LRK54_RS12020	0.80	-0.8
2,665,022	+		LRK54_RS12020	0.80	+0.8
2,665,022	+		LRK54_RS12020	0.80	+0.2
2,665,022	+		LRK54_RS12020	0.80	-1.2
2,665,022	+		LRK54_RS12020	0.80	-0.7
2,665,022	+		LRK54_RS12020	0.80	-0.7
2,665,022	+		LRK54_RS12020	0.80	-0.1
2,665,022	+		LRK54_RS12020	0.80	+0.2
2,665,022	+		LRK54_RS12020	0.80	-0.4
2,665,022	+		LRK54_RS12020	0.80	-2.2
2,665,022	+		LRK54_RS12020	0.80	-0.8
2,665,022	+		LRK54_RS12020	0.80	-1.7
2,665,022	+		LRK54_RS12020	0.80	-1.2
2,665,022	+		LRK54_RS12020	0.80	-0.3
2,665,022	+		LRK54_RS12020	0.80	-1.0
2,665,022	+		LRK54_RS12020	0.80	-1.2
2,665,022	+		LRK54_RS12020	0.80	-0.5
2,665,023	-		LRK54_RS12020	0.80	-1.0
2,665,023	-		LRK54_RS12020	0.80	-1.5
2,665,023	-		LRK54_RS12020	0.80	-0.5
2,665,023	-		LRK54_RS12020	0.80	-1.8
2,665,023	-		LRK54_RS12020	0.80	-0.9
2,665,023	-		LRK54_RS12020	0.80	-0.2
2,665,023	-		LRK54_RS12020	0.80	-0.2
2,665,023	-		LRK54_RS12020	0.80	-1.7
2,665,023	-		LRK54_RS12020	0.80	-0.3
2,665,023	-		LRK54_RS12020	0.80	-2.6
2,665,023	-		LRK54_RS12020	0.80	-0.7
2,665,023	-		LRK54_RS12020	0.80	-0.3
2,665,023	-		LRK54_RS12020	0.80	-0.0
2,665,023	-		LRK54_RS12020	0.80	-1.2
2,665,023	-		LRK54_RS12020	0.80	-0.3
2,665,023	-		LRK54_RS12020	0.80	-0.5
2,665,023	-		LRK54_RS12020	0.80	-0.7
2,665,023	-		LRK54_RS12020	0.80	-2.7
2,665,023	-		LRK54_RS12020	0.80	-1.9
2,665,023	-		LRK54_RS12020	0.80	-1.5
2,665,023	-		LRK54_RS12020	0.80	-3.0
2,665,023	-		LRK54_RS12020	0.80	-2.0
2,665,023	-		LRK54_RS12020	0.80	-0.2
2,665,023	-		LRK54_RS12020	0.80	-0.1
2,665,023	-		LRK54_RS12020	0.80	-0.7
2,665,023	-		LRK54_RS12020	0.80	-0.3
2,665,023	-		LRK54_RS12020	0.80	-1.3
2,665,023	-		LRK54_RS12020	0.80	-0.3
2,665,023	-		LRK54_RS12020	0.80	-0.3
2,665,023	-		LRK54_RS12020	0.80	-1.0
2,665,023	-		LRK54_RS12020	0.80	-0.7
2,665,023	-		LRK54_RS12020	0.80	-0.0
2,665,023	-		LRK54_RS12020	0.80	-0.3
2,665,023	-		LRK54_RS12020	0.80	+0.5
2,665,023	-		LRK54_RS12020	0.80	-2.4
2,665,023	-		LRK54_RS12020	0.80	-0.0
2,665,023	-		LRK54_RS12020	0.80	-1.3
2,665,023	-		LRK54_RS12020	0.80	-2.2
2,665,023	-		LRK54_RS12020	0.80	-1.4
2,665,023	-		LRK54_RS12020	0.80	-1.5
2,665,023	-		LRK54_RS12020	0.80	-0.6
2,665,079	+		LRK54_RS12020	0.86	-0.7
2,665,079	+		LRK54_RS12020	0.86	+0.1
2,665,079	+		LRK54_RS12020	0.86	-0.3
2,665,079	+		LRK54_RS12020	0.86	+1.4
2,665,079	+		LRK54_RS12020	0.86	-0.7
2,665,079	+		LRK54_RS12020	0.86	-0.5
2,665,079	+		LRK54_RS12020	0.86	-0.7
2,665,079	+		LRK54_RS12020	0.86	-1.5
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2,665,079	+		LRK54_RS12020	0.86	-1.9
2,665,079	+		LRK54_RS12020	0.86	+0.3
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2,665,080	-		LRK54_RS12020	0.86	-0.1
2,665,080	-		LRK54_RS12020	0.86	-0.8
2,665,080	-		LRK54_RS12020	0.86	-1.1
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2,665,080	-		LRK54_RS12020	0.86	-1.7
2,665,080	-		LRK54_RS12020	0.86	-3.6
2,665,080	-		LRK54_RS12020	0.86	-1.5
2,665,080	-		LRK54_RS12020	0.86	-1.2
2,665,080	-		LRK54_RS12020	0.86	-1.3
2,665,080	-		LRK54_RS12020	0.86	-0.3
2,665,080	-		LRK54_RS12020	0.86	+1.7
2,665,080	-		LRK54_RS12020	0.86	-1.3
2,665,113	-		LRK54_RS12020	0.90	+0.1
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2,665,113	-		LRK54_RS12020	0.90	-1.5
2,665,113	-		LRK54_RS12020	0.90	-0.3
2,665,193	+				+0.5
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2,665,194	-				-0.3
2,665,236	+				-1.7
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2,665,236	+				+1.0
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2,665,237	-				+1.7
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2,665,806	-				+0.1
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2,666,180	+		LRK54_RS12030	0.37	-1.2
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2,666,180	+		LRK54_RS12030	0.37	+1.1
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2,666,201	+		LRK54_RS12030	0.39	-2.9
2,666,201	+		LRK54_RS12030	0.39	+0.7
2,666,201	+		LRK54_RS12030	0.39	+0.4
2,666,201	+		LRK54_RS12030	0.39	+0.1
2,666,201	+		LRK54_RS12030	0.39	+1.7
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2,666,201	+		LRK54_RS12030	0.39	-1.3
2,666,201	+		LRK54_RS12030	0.39	+1.4
2,666,202	-		LRK54_RS12030	0.40	-0.7
2,666,202	-		LRK54_RS12030	0.40	+0.0
2,666,202	-		LRK54_RS12030	0.40	+0.1
2,666,202	-		LRK54_RS12030	0.40	-0.0
2,666,202	-		LRK54_RS12030	0.40	-0.9
2,666,202	-		LRK54_RS12030	0.40	-1.8
2,666,202	-		LRK54_RS12030	0.40	-0.5
2,666,202	-		LRK54_RS12030	0.40	+0.5