Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03989

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,421,213	+				+0.9
3,421,226	-				+0.1
3,421,266	-				+0.0
3,421,304	-				+1.7
3,421,330	+				-1.7
3,421,335	+				-0.9
3,421,343	-				+0.1
3,421,343	-				-0.4
3,421,356	+				+0.1
3,421,399	+				-0.6
3,421,437	+				-1.9
3,421,464	+				+1.1
3,421,464	+				-1.9
3,421,464	+				+0.1
3,421,464	+				+0.7
3,421,464	+				-1.8
3,421,465	+				-0.6
3,421,465	+				-2.2
3,421,472	-				-0.5
3,421,472	-				-0.9
3,421,472	-				+1.1
3,421,473	-				+0.7
3,421,473	-				+2.7
3,421,473	-				+0.4
3,421,493	+				+1.7
3,421,537	+				-0.8
3,421,545	-		CCNA_03250	0.11	-1.0
3,421,546	+		CCNA_03250	0.11	-1.1
3,421,554	-		CCNA_03250	0.12	-0.1
3,421,594	+		CCNA_03250	0.17	+0.7
3,421,646	+		CCNA_03250	0.23	+0.7
3,421,665	-		CCNA_03250	0.25	+0.7
3,421,682	-		CCNA_03250	0.28	+1.7
3,421,699	-		CCNA_03250	0.30	-1.5
3,421,699	-		CCNA_03250	0.30	-1.2
3,421,699	-		CCNA_03250	0.30	-0.8
3,421,703	+		CCNA_03250	0.30	+0.1
3,421,711	-		CCNA_03250	0.31	-1.1
3,421,711	-		CCNA_03250	0.31	-0.6
3,421,754	-		CCNA_03250	0.36	+1.1
3,421,810	-		CCNA_03250	0.43	+0.7
3,421,867	+		CCNA_03250	0.50	-0.3
3,421,940	+		CCNA_03250	0.59	-1.3
3,421,941	+		CCNA_03250	0.59	+0.1
3,421,941	+		CCNA_03250	0.59	-1.4
3,421,941	+		CCNA_03250	0.59	-0.9
3,421,942	+		CCNA_03250	0.59	+0.4
3,421,949	-		CCNA_03250	0.60	+0.4
3,421,949	-		CCNA_03250	0.60	+1.1
3,421,960	+		CCNA_03250	0.62	-0.9
3,421,991	+		CCNA_03250	0.65	-1.0
3,421,999	-		CCNA_03250	0.66	+2.7
3,422,045	+		CCNA_03250	0.72	+1.1
3,422,053	-		CCNA_03250	0.73	-0.2
3,422,058	+		CCNA_03250	0.74	-0.3
3,422,071	+		CCNA_03250	0.75	+1.1
3,422,073	+		CCNA_03250	0.75	-1.3
3,422,089	-		CCNA_03250	0.77	-0.3
3,422,117	+		CCNA_03250	0.81	-0.3
3,422,144	+		CCNA_03250	0.84	-0.9
3,422,144	+		CCNA_03250	0.84	+0.4
3,422,144	+		CCNA_03250	0.84	-0.5
3,422,149	+		CCNA_03250	0.85	+0.7
3,422,149	+		CCNA_03250	0.85	-1.3
3,422,152	-		CCNA_03250	0.85	+0.7
3,422,152	-		CCNA_03250	0.85	-0.8
3,422,152	-		CCNA_03250	0.85	-1.0
3,422,152	-		CCNA_03250	0.85	-0.5
3,422,152	-		CCNA_03250	0.85	-0.9
3,422,152	-		CCNA_03250	0.85	+1.1
3,422,152	-		CCNA_03250	0.85	+1.1
3,422,298	-				+3.0
3,422,315	-		CCNA_03989	0.11	+3.2
3,422,357	-		CCNA_03989	0.16	+3.6
3,422,394	-		CCNA_03989	0.19	+2.3
3,422,411	+		CCNA_03989	0.21	-0.6
3,422,417	+		CCNA_03989	0.22	+0.4
3,422,419	-		CCNA_03989	0.22	+3.7
3,422,430	+		CCNA_03989	0.23	-0.5
3,422,436	-		CCNA_03989	0.24	+3.2
3,422,436	-		CCNA_03989	0.24	+3.4
3,422,443	+		CCNA_03989	0.24	-0.1
3,422,446	-		CCNA_03989	0.25	+3.2
3,422,453	+		CCNA_03989	0.26	+1.1
3,422,453	+		CCNA_03989	0.26	+2.7
3,422,461	-		CCNA_03989	0.26	+3.6
3,422,461	-		CCNA_03989	0.26	+3.3
3,422,461	-		CCNA_03989	0.26	+3.6
3,422,466	-		CCNA_03989	0.27	+3.0
3,422,466	-		CCNA_03989	0.27	+4.2
3,422,466	-		CCNA_03989	0.27	+3.5
3,422,467	+		CCNA_03989	0.27	+1.7
3,422,477	-		CCNA_03989	0.28	+4.2
3,422,485	-		CCNA_03989	0.29	+3.6
3,422,485	-		CCNA_03989	0.29	+3.4
3,422,498	-		CCNA_03989	0.30	+3.7
3,422,536	-		CCNA_03989	0.34	+3.2
3,422,536	-		CCNA_03989	0.34	+3.2
3,422,541	-		CCNA_03989	0.35	+3.7
3,422,541	-		CCNA_03989	0.35	+3.8
3,422,541	-		CCNA_03989	0.35	+4.1
3,422,547	-		CCNA_03989	0.35	+3.8
3,422,576	+		CCNA_03989	0.38	+0.4
3,422,606	-		CCNA_03989	0.41	+3.5
3,422,631	-		CCNA_03989	0.44	+3.8
3,422,676	+		CCNA_03989	0.49	+1.1
3,422,679	-		CCNA_03989	0.49	+3.8
3,422,684	-		CCNA_03989	0.50	+3.2
3,422,684	-		CCNA_03989	0.50	+3.7
3,422,685	-		CCNA_03989	0.50	+3.3
3,422,714	-		CCNA_03989	0.53	+3.6
3,422,718	-		CCNA_03989	0.53	+3.6
3,422,718	-		CCNA_03989	0.53	+4.4
3,422,722	-		CCNA_03989	0.54	+4.6
3,422,779	+		CCNA_03989	0.59	+1.1
3,422,824	+		CCNA_03989	0.64	+0.4
3,422,836	-		CCNA_03989	0.65	+3.4
3,422,853	-		CCNA_03989	0.67	+4.1
3,422,858	-		CCNA_03989	0.68	+3.7
3,422,860	+		CCNA_03989	0.68	+0.9
3,422,927	+		CCNA_03989	0.75	+2.7
3,422,927	+		CCNA_03989	0.75	-0.1
3,422,954	-		CCNA_03989	0.78	+2.9
3,422,955	+		CCNA_03989	0.78	+1.1
3,423,019	+		CCNA_03989	0.84	+1.1
3,423,027	-		CCNA_03989	0.85	+3.6
3,423,055	-		CCNA_03989	0.88	+3.7
3,423,064	-		CCNA_03989	0.89	+4.2
3,423,064	-		CCNA_03989	0.89	+3.3
3,423,109	-				+3.6
3,423,133	+				+0.7
3,423,138	+				+1.7
3,423,234	-				-0.9
3,423,299	+				-1.8
3,423,307	+				+2.5
3,423,307	-				-1.9
3,423,314	+				+4.0
3,423,343	+				+3.7
3,423,343	+				+4.7
3,423,392	+				+3.1
3,423,397	+		CCNA_03252	0.23	+4.1
3,423,402	+		CCNA_03252	0.24	+4.1
3,423,492	+		CCNA_03252	0.48	+4.4
3,423,492	+		CCNA_03252	0.48	+4.2
3,423,517	+		CCNA_03252	0.54	+3.9
3,423,517	+		CCNA_03252	0.54	+3.9
3,423,517	+		CCNA_03252	0.54	+4.1
3,423,517	+		CCNA_03252	0.54	+4.3
3,423,522	+		CCNA_03252	0.55	+4.0
3,423,523	+		CCNA_03252	0.56	+3.5
3,423,524	+		CCNA_03252	0.56	+3.9
3,423,532	+		CCNA_03252	0.58	+4.3
3,423,532	+		CCNA_03252	0.58	+4.0
3,423,542	+		CCNA_03252	0.61	+3.9
3,423,590	+		CCNA_03252	0.73	+4.1
3,423,609	+		CCNA_03252	0.78	+4.0
3,423,652	+		CCNA_03252	0.90	+0.5
3,423,691	-				-1.8
3,423,756	-				+0.7
3,423,756	-				-0.6
3,423,765	+				-0.4
3,423,799	+				-0.1
3,423,799	+				+1.1
3,423,799	+				-1.6
3,423,802	-				-0.9
3,423,807	-				-0.0
3,423,814	+				-0.1
3,423,814	+				-1.5
3,423,814	+				-2.5
3,423,822	-				-0.5
3,423,822	-				+1.2
3,423,827	-		CCNA_03253	0.10	-0.1
3,423,837	+		CCNA_03253	0.11	+1.4
3,423,842	-		CCNA_03253	0.11	+0.1
3,423,884	-		CCNA_03253	0.15	-1.6
3,423,895	-		CCNA_03253	0.15	-2.0
3,423,900	+		CCNA_03253	0.16	-0.8
3,423,900	+		CCNA_03253	0.16	+0.7
3,423,900	+		CCNA_03253	0.16	-0.9
3,423,900	+		CCNA_03253	0.16	-1.5
3,423,908	-		CCNA_03253	0.16	+0.4
3,423,908	-		CCNA_03253	0.16	-0.9
3,423,908	-		CCNA_03253	0.16	-0.8
3,423,908	-		CCNA_03253	0.16	+1.1
3,423,921	-		CCNA_03253	0.17	+0.8
3,423,923	-		CCNA_03253	0.17	+1.1
3,423,949	+		CCNA_03253	0.19	+1.0
3,423,949	+		CCNA_03253	0.19	+1.3
3,423,957	-		CCNA_03253	0.20	-0.9
3,423,957	-		CCNA_03253	0.20	+0.6
3,423,982	+		CCNA_03253	0.22	-1.3
3,423,983	+		CCNA_03253	0.22	+1.1
3,423,983	+		CCNA_03253	0.22	+2.7
3,423,987	+		CCNA_03253	0.22	+0.9
3,423,987	+		CCNA_03253	0.22	+0.9
3,423,991	-		CCNA_03253	0.22	-0.3
3,424,002	-		CCNA_03253	0.23	+1.5
3,424,007	+		CCNA_03253	0.24	-0.0
3,424,026	-		CCNA_03253	0.25	-0.1
3,424,082	-		CCNA_03253	0.29	-2.5
3,424,082	-		CCNA_03253	0.29	+2.1
3,424,125	+		CCNA_03253	0.32	+0.4
3,424,125	+		CCNA_03253	0.32	-1.6
3,424,128	-		CCNA_03253	0.33	-0.0
3,424,128	-		CCNA_03253	0.33	+1.9
3,424,133	-		CCNA_03253	0.33	+0.1
3,424,133	-		CCNA_03253	0.33	+0.2
3,424,133	-		CCNA_03253	0.33	-0.4