Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03812

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,974,962	+		CCNA_03811	0.20	+2.9
3,974,962	+		CCNA_03811	0.20	+2.0
3,974,967	+		CCNA_03811	0.20	-0.4
3,974,967	+		CCNA_03811	0.20	-0.7
3,974,967	+		CCNA_03811	0.20	-0.9
3,974,967	+		CCNA_03811	0.20	+1.3
3,974,967	+		CCNA_03811	0.20	-0.9
3,974,967	+		CCNA_03811	0.20	-2.9
3,974,967	+		CCNA_03811	0.20	-0.1
3,974,970	-		CCNA_03811	0.20	+1.6
3,974,975	-		CCNA_03811	0.21	+2.0
3,974,975	-		CCNA_03811	0.21	+0.9
3,974,975	-		CCNA_03811	0.21	+1.1
3,974,990	+		CCNA_03811	0.23	+1.7
3,974,993	-		CCNA_03811	0.23	+0.3
3,975,024	-		CCNA_03811	0.26	+0.6
3,975,035	-		CCNA_03811	0.28	+0.6
3,975,035	-		CCNA_03811	0.28	+2.1
3,975,066	+		CCNA_03811	0.31	+0.3
3,975,074	-		CCNA_03811	0.32	+1.2
3,975,144	-		CCNA_03811	0.40	+1.1
3,975,176	+		CCNA_03811	0.43	+0.7
3,975,210	+		CCNA_03811	0.47	-1.6
3,975,214	-		CCNA_03811	0.48	+0.4
3,975,219	-		CCNA_03811	0.48	+0.6
3,975,235	-		CCNA_03811	0.50	+1.8
3,975,235	-		CCNA_03811	0.50	+1.9
3,975,275	+		CCNA_03811	0.54	+1.3
3,975,300	-		CCNA_03811	0.57	+0.1
3,975,300	-		CCNA_03811	0.57	+2.6
3,975,358	+		CCNA_03811	0.63	-1.5
3,975,358	+		CCNA_03811	0.63	-1.4
3,975,366	-		CCNA_03811	0.64	+0.5
3,975,366	-		CCNA_03811	0.64	-0.2
3,975,420	+		CCNA_03811	0.70	-0.1
3,975,428	-		CCNA_03811	0.71	+1.5
3,975,437	+		CCNA_03811	0.72	-0.7
3,975,450	+		CCNA_03811	0.74	-0.3
3,975,464	+		CCNA_03811	0.75	+1.7
3,975,464	+		CCNA_03811	0.75	+2.3
3,975,464	+		CCNA_03811	0.75	-0.7
3,975,474	-		CCNA_03811	0.76	-0.4
3,975,567	+		CCNA_03811	0.87	+0.7
3,975,585	+		CCNA_03811	0.89	-1.5
3,975,638	+				-0.7
3,975,643	-				-1.2
3,975,740	-				+0.0
3,975,744	+				-0.3
3,975,744	+				-0.1
3,975,744	+				-0.3
3,975,790	+				-0.1
3,975,802	+				-0.3
3,975,841	-				+1.3
3,975,879	-				+2.3
3,975,879	-				-0.4
3,975,904	-				+1.4
3,975,937	+				-0.7
3,976,000	+		CCNA_03812	0.16	+0.3
3,976,013	+		CCNA_03812	0.18	+1.1
3,976,013	+		CCNA_03812	0.18	+0.4
3,976,092	+		CCNA_03812	0.33	-1.3
3,976,100	-		CCNA_03812	0.34	-1.6
3,976,105	-		CCNA_03812	0.35	-1.5
3,976,183	+		CCNA_03812	0.49	-2.6
3,976,183	+		CCNA_03812	0.49	-0.2
3,976,205	+		CCNA_03812	0.53	+1.3
3,976,205	+		CCNA_03812	0.53	-1.1
3,976,205	+		CCNA_03812	0.53	-0.4
3,976,213	-		CCNA_03812	0.55	+2.3
3,976,213	-		CCNA_03812	0.55	-2.8
3,976,213	-		CCNA_03812	0.55	-0.6
3,976,263	+		CCNA_03812	0.64	-0.9
3,976,263	+		CCNA_03812	0.64	-0.3
3,976,263	+		CCNA_03812	0.64	-1.8
3,976,263	+				+1.3
3,976,263	+		CCNA_03812	0.64	+0.3
3,976,268	+		CCNA_03812	0.65	-2.1
3,976,271	-		CCNA_03812	0.65	-0.3
3,976,271	-		CCNA_03812	0.65	-1.3
3,976,271	-		CCNA_03812	0.65	-1.3
3,976,271	-		CCNA_03812	0.65	-1.2
3,976,271	-		CCNA_03812	0.65	-1.3
3,976,271	-		CCNA_03812	0.65	-0.7
3,976,271	-		CCNA_03812	0.65	-1.4
3,976,271	-		CCNA_03812	0.65	-1.1
3,976,337	-		CCNA_03812	0.77	-0.3
3,976,362	+		CCNA_03812	0.82	+0.9
3,976,376	+		CCNA_03812	0.84	-2.2
3,976,393	+		CCNA_03812	0.87	-1.3
3,976,416	-				-3.8
3,976,435	+				-2.1
3,976,456	+				-1.4
3,976,464	-				+2.8
3,976,464	-				-2.4
3,976,464	-				-1.1
3,976,469	-				+2.3
3,976,474	-				-1.3
3,976,509	-				-1.3
3,976,566	-				-0.3
3,976,598	+				+1.0
3,976,599	+				+1.0
3,976,603	+				+1.3
3,976,606	-				-0.1
3,976,606	-				-0.7
3,976,613	+				+0.8
3,976,679	-				-1.6
3,976,701	+				+1.0
3,976,701	+				+0.2
3,976,725	-				+2.3
3,976,746	+				+4.0
3,976,755	-		CCNA_03813	0.10	-0.1
3,976,756	+		CCNA_03813	0.10	+1.8
3,976,761	+		CCNA_03813	0.11	+1.0
3,976,769	-		CCNA_03813	0.11	-1.3
3,976,774	-		CCNA_03813	0.12	-0.5
3,976,774	-		CCNA_03813	0.12	-0.3
3,976,796	-		CCNA_03813	0.13	+0.7
3,976,796	-		CCNA_03813	0.13	+1.3
3,976,887	+		CCNA_03813	0.20	+0.5
3,976,895	-		CCNA_03813	0.20	-0.7
3,976,919	+				+2.3
3,976,926	-		CCNA_03813	0.23	+0.7
3,976,931	-		CCNA_03813	0.23	-0.7
3,977,002	-		CCNA_03813	0.28	-0.5
3,977,052	+		CCNA_03813	0.32	+2.2
3,977,057	+		CCNA_03813	0.32	+2.7
3,977,060	-		CCNA_03813	0.32	-2.6
3,977,090	-		CCNA_03813	0.35	-2.1
3,977,145	+		CCNA_03813	0.39	+2.7
3,977,147	+		CCNA_03813	0.39	+1.9
3,977,214	-		CCNA_03813	0.44	-0.5
3,977,221	+		CCNA_03813	0.44	+2.2
3,977,221	+		CCNA_03813	0.44	+2.4
3,977,226	+		CCNA_03813	0.44	+3.0
3,977,229	-		CCNA_03813	0.45	-2.7
3,977,229	-		CCNA_03813	0.45	+0.7
3,977,234	-		CCNA_03813	0.45	-1.1
3,977,234	-		CCNA_03813	0.45	+2.0
3,977,234	-		CCNA_03813	0.45	-0.7
3,977,275	+		CCNA_03813	0.48	+0.6
3,977,285	+		CCNA_03813	0.49	+2.8
3,977,285	+		CCNA_03813	0.49	+1.9
3,977,293	-		CCNA_03813	0.49	-0.5
3,977,293	-		CCNA_03813	0.49	-2.1
3,977,293	-		CCNA_03813	0.49	-2.0
3,977,342	-		CCNA_03813	0.53	+1.1
3,977,363	-		CCNA_03813	0.54	+1.3
3,977,438	-		CCNA_03813	0.60	+3.3