Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03807

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,971,019	+				-0.3
3,971,044	-				-0.5
3,971,080	+				+0.5
3,971,085	+				-0.9
3,971,104	+				+1.9
3,971,104	+				+1.3
3,971,104	+				-0.2
3,971,211	-				-0.6
3,971,280	-		CCNA_03806	0.16	-1.4
3,971,288	+		CCNA_03806	0.17	+2.1
3,971,304	-		CCNA_03806	0.19	-1.6
3,971,366	+		CCNA_03806	0.26	+2.1
3,971,366	+		CCNA_03806	0.26	+2.3
3,971,366	+		CCNA_03806	0.26	+0.5
3,971,366	+		CCNA_03806	0.26	+2.3
3,971,366	+		CCNA_03806	0.26	+1.8
3,971,366	+		CCNA_03806	0.26	+2.0
3,971,366	+		CCNA_03806	0.26	+2.4
3,971,374	-		CCNA_03806	0.27	-0.3
3,971,374	-		CCNA_03806	0.27	+2.0
3,971,374	-		CCNA_03806	0.27	+0.7
3,971,374	-		CCNA_03806	0.27	+1.6
3,971,374	-		CCNA_03806	0.27	+1.3
3,971,374	-		CCNA_03806	0.27	-0.6
3,971,374	-		CCNA_03806	0.27	+1.4
3,971,374	-		CCNA_03806	0.27	-0.7
3,971,374	-		CCNA_03806	0.27	-0.5
3,971,379	-		CCNA_03806	0.28	+0.3
3,971,379	-		CCNA_03806	0.28	+0.6
3,971,379	-		CCNA_03806	0.28	+1.2
3,971,404	-		CCNA_03806	0.31	+2.5
3,971,409	-		CCNA_03806	0.31	-0.1
3,971,495	+		CCNA_03806	0.41	+1.3
3,971,503	-		CCNA_03806	0.42	+1.3
3,971,542	+		CCNA_03806	0.47	+2.1
3,971,555	-		CCNA_03806	0.48	-0.5
3,971,575	-		CCNA_03806	0.51	+0.5
3,971,585	+		CCNA_03806	0.52	+2.5
3,971,627	+		CCNA_03806	0.57	+2.3
3,971,657	+		CCNA_03806	0.60	+1.7
3,971,657	+		CCNA_03806	0.60	+1.8
3,971,657	+		CCNA_03806	0.60	+2.1
3,971,658	-		CCNA_03806	0.60	-2.0
3,971,672	+		CCNA_03806	0.62	+2.5
3,971,677	+		CCNA_03806	0.63	+2.4
3,971,685	+		CCNA_03806	0.64	+2.0
3,971,685	+		CCNA_03806	0.64	+3.0
3,971,693	-		CCNA_03806	0.64	+0.7
3,971,693	-		CCNA_03806	0.64	+0.1
3,971,787	-		CCNA_03806	0.75	+0.3
3,971,790	+		CCNA_03806	0.76	+3.7
3,971,837	+		CCNA_03806	0.81	+2.2
3,971,837	+		CCNA_03806	0.81	+2.7
3,971,837	+		CCNA_03806	0.81	+2.7
3,971,845	-		CCNA_03806	0.82	-1.2
3,971,845	-		CCNA_03806	0.82	-0.3
3,971,845	-		CCNA_03806	0.82	+0.3
3,971,850	+		CCNA_03806	0.83	+2.3
3,971,850	+		CCNA_03806	0.83	+2.2
3,971,890	+		CCNA_03806	0.87	+2.5
3,971,897	-		CCNA_03806	0.88	+2.3
3,971,986	+				+2.3
3,971,999	-				-0.7
3,972,000	-				-1.1
3,972,001	-				-1.1
3,972,058	+				+2.5
3,972,058	+				+2.4
3,972,059	-				+0.6
3,972,095	+		CCNA_03807	0.15	+2.5
3,972,103	-		CCNA_03807	0.16	-1.1
3,972,103	-		CCNA_03807	0.16	+2.3
3,972,105	+		CCNA_03807	0.17	+2.2
3,972,106	+		CCNA_03807	0.17	+2.2
3,972,106	+		CCNA_03807	0.17	+4.3
3,972,133	+		CCNA_03807	0.21	+2.5
3,972,150	+		CCNA_03807	0.23	+3.0
3,972,150	+		CCNA_03807	0.23	+2.2
3,972,150	+		CCNA_03807	0.23	+2.5
3,972,150	+		CCNA_03807	0.23	+2.3
3,972,150	+		CCNA_03807	0.23	+2.3
3,972,150	+		CCNA_03807	0.23	+0.1
3,972,150	+		CCNA_03807	0.23	+4.6
3,972,150	+		CCNA_03807	0.23	+1.1
3,972,210	-		CCNA_03807	0.32	-1.1
3,972,299	+		CCNA_03807	0.46	+2.1
3,972,307	-		CCNA_03807	0.47	-1.8
3,972,307	-		CCNA_03807	0.47	-0.0
3,972,338	-		CCNA_03807	0.52	+1.3
3,972,396	-		CCNA_03807	0.60	+2.7
3,972,398	-		CCNA_03807	0.61	+0.3
3,972,460	+		CCNA_03807	0.70	+1.2
3,972,465	+		CCNA_03807	0.71	+2.6
3,972,475	+		CCNA_03807	0.72	+2.1
3,972,483	-		CCNA_03807	0.74	-0.3
3,972,490	+		CCNA_03807	0.75	+2.3
3,972,493	+		CCNA_03807	0.75	+2.7
3,972,493	+		CCNA_03807	0.75	+2.2
3,972,493	+		CCNA_03807	0.75	+2.2
3,972,493	+		CCNA_03807	0.75	+2.4
3,972,493	+		CCNA_03807	0.75	+2.6
3,972,493	+		CCNA_03807	0.75	+2.3
3,972,493	+		CCNA_03807	0.75	+2.1
3,972,493	-		CCNA_03807	0.75	+0.7
3,972,501	-		CCNA_03807	0.76	+0.4
3,972,501	-		CCNA_03807	0.76	+1.3
3,972,520	-		CCNA_03807	0.79	+2.3
3,972,542	-		CCNA_03807	0.83	+0.7
3,972,542	-		CCNA_03807	0.83	-0.4
3,972,542	-		CCNA_03807	0.83	+0.6
3,972,552	+		CCNA_03807	0.84	+2.3
3,972,662	+				+2.9
3,972,662	+				+2.1
3,972,684	+				+1.7
3,972,753	+		CCNA_03808	0.13	+2.1
3,972,753	+		CCNA_03808	0.13	+2.3
3,972,753	+		CCNA_03808	0.13	+1.9
3,972,781	-		CCNA_03808	0.18	+1.3
3,972,857	+		CCNA_03808	0.33	+2.8
3,972,873	+		CCNA_03808	0.36	+2.0
3,972,889	+		CCNA_03808	0.39	+2.4
3,972,897	+		CCNA_03808	0.41	+2.5
3,972,897	+		CCNA_03808	0.41	+3.6
3,972,902	+		CCNA_03808	0.42	+1.7
3,972,905	-		CCNA_03808	0.42	+1.3
3,972,909	+		CCNA_03808	0.43	+2.9
3,972,909	+		CCNA_03808	0.43	+2.9
3,972,972	+				+4.3
3,972,991	+		CCNA_03808	0.59	+2.7
3,973,000	+		CCNA_03808	0.61	+2.9
3,973,010	+		CCNA_03808	0.63	+1.4
3,973,015	+		CCNA_03808	0.64	+3.0
3,973,049	+		CCNA_03808	0.70	+2.9
3,973,049	+		CCNA_03808	0.70	+3.0
3,973,049	+		CCNA_03808	0.70	+2.7
3,973,049	+		CCNA_03808	0.70	+2.6
3,973,057	-		CCNA_03808	0.72	+0.2
3,973,057	-		CCNA_03808	0.72	-1.1
3,973,155	-				-1.6
3,973,194	+				+2.7
3,973,202	-				-0.1
3,973,249	+				+2.1
3,973,250	+				+2.8
3,973,258	-				-0.7
3,973,265	+				+3.0
3,973,265	+				+2.8
3,973,273	-				+4.6
3,973,273	-				+1.3
3,973,273	-				-0.3
3,973,295	+		CCNA_03809	0.11	+2.8
3,973,400	+		CCNA_03809	0.24	+2.8
3,973,447	-		CCNA_03809	0.30	-1.2
3,973,468	+		CCNA_03809	0.33	+2.7
3,973,473	+		CCNA_03809	0.33	+2.6
3,973,476	-		CCNA_03809	0.34	+0.1
3,973,476	-		CCNA_03809	0.34	+1.0
3,973,483	+		CCNA_03809	0.35	+2.5
3,973,554	-		CCNA_03809	0.43	+1.3
3,973,585	+		CCNA_03809	0.47	+2.3
3,973,593	-		CCNA_03809	0.48	+1.0
3,973,593	-		CCNA_03809	0.48	+1.0
3,973,593	-		CCNA_03809	0.48	+3.3
3,973,602	+		CCNA_03809	0.49	+1.4