Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03622

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,776,543	-				-3.5
3,776,543	-				-0.9
3,776,586	-				-1.7
3,776,612	+				-2.2
3,776,639	-		CCNA_03621	0.12	-1.8
3,776,651	+		CCNA_03621	0.13	-0.5
3,776,651	+		CCNA_03621	0.13	-2.2
3,776,655	-		CCNA_03621	0.14	+2.0
3,776,664	-		CCNA_03621	0.15	-1.4
3,776,668	+		CCNA_03621	0.15	+0.3
3,776,678	-		CCNA_03621	0.17	-1.0
3,776,728	+		CCNA_03621	0.23	-0.3
3,776,747	+		CCNA_03621	0.25	+0.2
3,776,747	-		CCNA_03621	0.25	-0.6
3,776,749	+		CCNA_03621	0.25	-0.4
3,776,749	+		CCNA_03621	0.25	-0.4
3,776,755	-		CCNA_03621	0.26	-1.2
3,776,757	-		CCNA_03621	0.26	+1.7
3,776,757	-		CCNA_03621	0.26	-0.5
3,776,761	+		CCNA_03621	0.26	+0.9
3,776,761	+		CCNA_03621	0.26	-2.1
3,776,761	+		CCNA_03621	0.26	-0.4
3,776,761	+		CCNA_03621	0.26	-2.6
3,776,761	+		CCNA_03621	0.26	+0.7
3,776,769	-		CCNA_03621	0.27	-1.0
3,776,769	-		CCNA_03621	0.27	-2.4
3,776,769	-		CCNA_03621	0.27	-2.0
3,776,806	+		CCNA_03621	0.32	-0.0
3,776,924	+		CCNA_03621	0.46	-0.5
3,776,940	+		CCNA_03621	0.48	-0.4
3,776,948	-		CCNA_03621	0.49	-0.9
3,777,014	+		CCNA_03621	0.56	+0.7
3,777,047	-		CCNA_03621	0.60	+1.3
3,777,154	-		CCNA_03621	0.73	+0.3
3,777,154	-		CCNA_03621	0.73	-1.8
3,777,189	-		CCNA_03621	0.77	-0.9
3,777,191	+		CCNA_03621	0.77	-1.0
3,777,191	+		CCNA_03621	0.77	-0.0
3,777,199	+		CCNA_03621	0.78	-3.1
3,777,199	-		CCNA_03621	0.78	-0.0
3,777,207	-		CCNA_03621	0.79	-0.2
3,777,315	+				-1.7
3,777,315	+				+1.3
3,777,315	+				-2.4
3,777,345	+				-3.4
3,777,377	+				-0.5
3,777,392	-				+1.1
3,777,392	-				-1.9
3,777,394	+				-0.9
3,777,394	+				-0.0
3,777,399	+				-0.7
3,777,402	-				-0.2
3,777,402	-				-1.7
3,777,402	-				-0.7
3,777,407	-				-0.3
3,777,407	-				+1.3
3,777,538	-				-0.7
3,777,544	+				+1.6
3,777,548	-				-2.0
3,777,564	+		CCNA_03622	0.13	+2.2
3,777,576	+		CCNA_03622	0.17	+2.1
3,777,584	-		CCNA_03622	0.19	-1.3
3,777,591	+		CCNA_03622	0.21	+3.3
3,777,591	+		CCNA_03622	0.21	+2.8
3,777,592	+		CCNA_03622	0.21	+2.2
3,777,608	+		CCNA_03622	0.26	+2.9
3,777,608	+		CCNA_03622	0.26	+2.2
3,777,608	+		CCNA_03622	0.26	+3.2
3,777,608	+		CCNA_03622	0.26	+3.5
3,777,608	+		CCNA_03622	0.26	+3.0
3,777,608	+		CCNA_03622	0.26	+2.2
3,777,608	+		CCNA_03622	0.26	+2.7
3,777,608	+		CCNA_03622	0.26	+3.2
3,777,613	+		CCNA_03622	0.27	+2.0
3,777,613	+		CCNA_03622	0.27	+2.2
3,777,616	-		CCNA_03622	0.28	+1.3
3,777,616	-		CCNA_03622	0.28	-1.0
3,777,616	-		CCNA_03622	0.28	+0.3
3,777,616	-		CCNA_03622	0.28	-1.7
3,777,616	-		CCNA_03622	0.28	-1.5
3,777,616	-		CCNA_03622	0.28	+0.3
3,777,616	-		CCNA_03622	0.28	-0.9
3,777,616	-		CCNA_03622	0.28	+0.7
3,777,621	-		CCNA_03622	0.29	+1.2
3,777,621	-				+2.3
3,777,628	-		CCNA_03622	0.31	+1.3
3,777,694	+		CCNA_03622	0.49	+2.4
3,777,729	+		CCNA_03622	0.59	+2.1
3,777,734	+		CCNA_03622	0.60	+2.3
3,777,747	+		CCNA_03622	0.64	+2.8
3,777,749	-		CCNA_03622	0.64	+0.7
3,777,753	-		CCNA_03622	0.66	-0.7
3,777,793	+		CCNA_03622	0.77	+3.2
3,777,794	+		CCNA_03622	0.77	+3.4
3,777,802	-		CCNA_03622	0.79	-0.3
3,777,802	-		CCNA_03622	0.79	-1.2
3,777,810	-		CCNA_03622	0.81	+0.5
3,777,821	-		CCNA_03622	0.84	-0.0
3,777,895	+				-1.8
3,777,931	+				-1.1
3,778,001	+		CCNA_03623	0.11	+2.3
3,778,009	+		CCNA_03623	0.11	-1.2
3,778,047	+		CCNA_03623	0.14	-2.1
3,778,047	+		CCNA_03623	0.14	-2.3
3,778,055	-		CCNA_03623	0.15	-0.5
3,778,067	+		CCNA_03623	0.16	-1.5
3,778,180	-		CCNA_03623	0.25	-2.1
3,778,233	+				+3.9
3,778,302	+		CCNA_03623	0.35	-1.0
3,778,305	-		CCNA_03623	0.36	-1.2
3,778,364	-		CCNA_03623	0.41	-1.2
3,778,414	+		CCNA_03623	0.45	-1.8
3,778,414	+		CCNA_03623	0.45	-1.2
3,778,419	+		CCNA_03623	0.45	-2.0
3,778,419	+		CCNA_03623	0.45	+0.9
3,778,419	+		CCNA_03623	0.45	-0.1
3,778,439	-		CCNA_03623	0.47	-0.5
3,778,446	-		CCNA_03623	0.47	+0.9
3,778,448	+		CCNA_03623	0.48	-0.2
3,778,449	-		CCNA_03623	0.48	-1.3
3,778,557	+		CCNA_03623	0.57	+1.3
3,778,557	+		CCNA_03623	0.57	-0.0
3,778,578	-		CCNA_03623	0.58	-2.6
3,778,578	-		CCNA_03623	0.58	-2.6
3,778,583	+		CCNA_03623	0.59	+1.6
3,778,584	+		CCNA_03623	0.59	+0.6
3,778,594	-		CCNA_03623	0.60	-0.2
3,778,651	-		CCNA_03623	0.64	-1.2
3,778,657	-		CCNA_03623	0.65	+2.3
3,778,680	+		CCNA_03623	0.67	-1.3
3,778,685	+		CCNA_03623	0.67	-0.9
3,778,685	-		CCNA_03623	0.67	-2.0
3,778,723	+		CCNA_03623	0.70	-1.0
3,778,729	+		CCNA_03623	0.71	-1.5
3,778,729	+		CCNA_03623	0.71	-1.9
3,778,742	-		CCNA_03623	0.72	+1.5
3,778,749	+		CCNA_03623	0.73	-0.0
3,778,833	+		CCNA_03623	0.80	-1.8
3,778,833	+		CCNA_03623	0.80	-0.9
3,778,841	-		CCNA_03623	0.80	-0.5
3,778,857	+		CCNA_03623	0.82	+1.7
3,778,864	+		CCNA_03623	0.82	-1.1
3,778,864	+		CCNA_03623	0.82	-0.5
3,778,865	-		CCNA_03623	0.82	-1.4