Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03619

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,772,528	-		CCNA_03617	0.58	-0.9
3,772,543	+		CCNA_03617	0.62	+0.9
3,772,543	+		CCNA_03617	0.62	+0.9
3,772,581	-		CCNA_03617	0.70	+0.3
3,772,611	-		CCNA_03617	0.77	+0.3
3,772,622	+		CCNA_03617	0.79	+1.2
3,772,644	+		CCNA_03617	0.84	+0.4
3,772,645	+		CCNA_03617	0.84	-0.9
3,772,654	+		CCNA_03617	0.86	+1.5
3,772,662	-		CCNA_03617	0.88	+1.2
3,772,662	-		CCNA_03617	0.88	-2.2
3,772,672	+				+1.9
3,772,711	+				+0.5
3,772,729	+				+0.6
3,772,729	+				+0.6
3,772,737	-				+0.3
3,772,737	-				-1.6
3,772,742	-				-0.0
3,772,742	-				-0.0
3,772,751	+				+1.2
3,772,769	+				+0.1
3,772,772	+				+1.3
3,772,797	+		CCNA_03618	0.14	+1.5
3,772,809	+		CCNA_03618	0.16	+1.8
3,772,815	-		CCNA_03618	0.17	+1.3
3,772,916	+		CCNA_03618	0.35	+1.6
3,772,916	+		CCNA_03618	0.35	-0.1
3,772,916	+		CCNA_03618	0.35	+0.6
3,772,931	+		CCNA_03618	0.37	+1.8
3,772,967	-		CCNA_03618	0.44	+0.5
3,772,971	+		CCNA_03618	0.44	+1.0
3,772,982	+		CCNA_03618	0.46	+1.2
3,772,989	+		CCNA_03618	0.47	+1.6
3,772,999	+		CCNA_03618	0.49	+1.6
3,772,999	+		CCNA_03618	0.49	+1.6
3,773,007	-		CCNA_03618	0.51	+0.7
3,773,007	-		CCNA_03618	0.51	+0.3
3,773,040	+		CCNA_03618	0.56	+1.3
3,773,040	+		CCNA_03618	0.56	+2.1
3,773,044	+		CCNA_03618	0.57	+1.7
3,773,045	+		CCNA_03618	0.57	+3.2
3,773,045	+		CCNA_03618	0.57	+1.7
3,773,048	-		CCNA_03618	0.58	-1.4
3,773,048	-		CCNA_03618	0.58	-0.3
3,773,068	-		CCNA_03618	0.61	-0.0
3,773,075	+		CCNA_03618	0.62	+1.7
3,773,083	-		CCNA_03618	0.64	+0.3
3,773,115	+		CCNA_03618	0.69	+1.5
3,773,129	-		CCNA_03618	0.72	+1.2
3,773,153	-		CCNA_03618	0.76	+0.8
3,773,250	+				+2.2
3,773,251	+				+2.0
3,773,286	-				+0.1
3,773,288	+				+2.8
3,773,318	-				+0.8
3,773,328	+				+2.8
3,773,446	+				-0.1
3,773,454	-				-0.9
3,773,526	+				+2.8
3,773,526	+				+1.3
3,773,526	+				-0.3
3,773,526	+				+2.3
3,773,534	-				-0.9
3,773,534	-				+1.3
3,773,534	-				+1.3
3,773,539	-				-0.7
3,773,585	+				+2.1
3,773,593	-				+1.5
3,773,604	+				+2.1
3,773,647	+				+3.3
3,773,680	+				+4.1
3,773,688	-				+0.7
3,773,688	-				+0.3
3,773,694	+				+2.5
3,773,702	+		CCNA_03619	0.10	+3.9
3,773,702	-		CCNA_03619	0.10	+1.6
3,773,707	+		CCNA_03619	0.10	+2.4
3,773,715	-		CCNA_03619	0.11	-1.2
3,773,724	+		CCNA_03619	0.11	+1.7
3,773,734	-		CCNA_03619	0.12	-2.1
3,773,831	+		CCNA_03619	0.16	+1.5
3,773,892	-		CCNA_03619	0.19	-0.4
3,773,893	-		CCNA_03619	0.19	-0.3
3,773,959	+		CCNA_03619	0.22	+2.9
3,773,967	-		CCNA_03619	0.22	+1.4
3,773,984	+		CCNA_03619	0.23	+3.6
3,773,992	-		CCNA_03619	0.24	+0.4
3,773,998	-		CCNA_03619	0.24	-2.5
3,774,007	+		CCNA_03619	0.24	+3.2
3,774,023	+		CCNA_03619	0.25	+2.0
3,774,024	+		CCNA_03619	0.25	+2.3
3,774,028	+		CCNA_03619	0.25	+1.6
3,774,036	+		CCNA_03619	0.26	+2.6
3,774,062	+		CCNA_03619	0.27	+3.5
3,774,083	+		CCNA_03619	0.28	+3.1
3,774,083	+		CCNA_03619	0.28	+2.5
3,774,083	+		CCNA_03619	0.28	+1.5
3,774,083	+		CCNA_03619	0.28	+2.5
3,774,089	+		CCNA_03619	0.28	+4.0
3,774,089	+		CCNA_03619	0.28	+2.5
3,774,091	-		CCNA_03619	0.28	+2.3
3,774,091	-		CCNA_03619	0.28	+3.0
3,774,091	-		CCNA_03619	0.28	+0.6
3,774,097	-		CCNA_03619	0.29	-1.3
3,774,099	+		CCNA_03619	0.29	+3.7
3,774,099	+		CCNA_03619	0.29	+2.9
3,774,099	+		CCNA_03619	0.29	+3.2
3,774,099	+		CCNA_03619	0.29	+2.7
3,774,099	+		CCNA_03619	0.29	+3.0
3,774,107	-		CCNA_03619	0.29	-0.5
3,774,107	-		CCNA_03619	0.29	-2.0
3,774,130	-		CCNA_03619	0.30	-0.9
3,774,152	+		CCNA_03619	0.31	+2.9
3,774,185	+		CCNA_03619	0.33	+2.2
3,774,188	-		CCNA_03619	0.33	+0.1
3,774,188	-		CCNA_03619	0.33	-2.7
3,774,193	-		CCNA_03619	0.33	-0.9
3,774,200	+		CCNA_03619	0.33	+3.6
3,774,201	+		CCNA_03619	0.34	+2.4
3,774,229	-		CCNA_03619	0.35	-0.7
3,774,239	+		CCNA_03619	0.35	+2.6
3,774,239	+		CCNA_03619	0.35	+3.7
3,774,247	-		CCNA_03619	0.36	-2.6
3,774,247	-		CCNA_03619	0.36	+1.0
3,774,247	-		CCNA_03619	0.36	+1.3
3,774,247	-		CCNA_03619	0.36	-1.6
3,774,247	-		CCNA_03619	0.36	+0.3
3,774,270	-		CCNA_03619	0.37	-0.4
3,774,319	-		CCNA_03619	0.39	+2.3
3,774,319	-		CCNA_03619	0.39	-0.9
3,774,347	+		CCNA_03619	0.40	+3.2
3,774,399	-		CCNA_03619	0.43	+1.3
3,774,401	+		CCNA_03619	0.43	+2.3
3,774,401	+		CCNA_03619	0.43	+4.2
3,774,401	+		CCNA_03619	0.43	+1.8
3,774,401	+		CCNA_03619	0.43	+2.5
3,774,401	+		CCNA_03619	0.43	+3.5
3,774,401	+		CCNA_03619	0.43	+2.2
3,774,409	-		CCNA_03619	0.43	+0.7
3,774,409	-		CCNA_03619	0.43	-1.0
3,774,409	-		CCNA_03619	0.43	-0.5
3,774,409	-		CCNA_03619	0.43	-0.9
3,774,409	-		CCNA_03619	0.43	+2.3
3,774,409	-		CCNA_03619	0.43	+1.1
3,774,409	-		CCNA_03619	0.43	+1.3
3,774,409	-		CCNA_03619	0.43	-1.3
3,774,409	-		CCNA_03619	0.43	-2.5
3,774,409	-		CCNA_03619	0.43	-0.6
3,774,415	+		CCNA_03619	0.44	+3.1
3,774,484	+		CCNA_03619	0.47	+3.2
3,774,484	-		CCNA_03619	0.47	-1.0
3,774,491	-		CCNA_03619	0.47	-2.4
3,774,492	-		CCNA_03619	0.47	+1.7
3,774,501	+		CCNA_03619	0.48	+2.9
3,774,503	+		CCNA_03619	0.48	+2.2
3,774,536	+		CCNA_03619	0.49	+2.4
3,774,536	+		CCNA_03619	0.49	+3.0
3,774,586	-		CCNA_03619	0.52	-0.2
3,774,592	+		CCNA_03619	0.52	+3.1
3,774,600	-		CCNA_03619	0.52	+1.3
3,774,602	-		CCNA_03619	0.52	-0.0
3,774,673	-		CCNA_03619	0.56	+0.1
3,774,673	-		CCNA_03619	0.56	+0.7
3,774,695	+		CCNA_03619	0.57	+3.6
3,774,703	-		CCNA_03619	0.57	-1.4
3,774,703	-		CCNA_03619	0.57	-1.9
3,774,754	-		CCNA_03619	0.60	-2.7
3,774,770	+		CCNA_03619	0.60	+3.1
3,774,859	-		CCNA_03619	0.65	-1.0
3,774,892	+		CCNA_03619	0.66	+3.0
3,774,894	-		CCNA_03619	0.66	-0.7
3,774,912	+		CCNA_03619	0.67	+3.7
3,774,956	+				+4.1
3,774,964	-		CCNA_03619	0.69	+0.7
3,774,964	-		CCNA_03619	0.69	-0.3
3,774,964	-		CCNA_03619	0.69	-0.3
3,774,971	+		CCNA_03619	0.70	+3.5
3,774,971	+		CCNA_03619	0.70	+3.4
3,774,996	-		CCNA_03619	0.71	-0.0
3,775,008	-		CCNA_03619	0.72	+2.8
3,775,009	-		CCNA_03619	0.72	+3.1
3,775,053	+		CCNA_03619	0.74	+3.6
3,775,069	+		CCNA_03619	0.74	+3.2
3,775,199	-		CCNA_03619	0.81	+0.3
3,775,208	+		CCNA_03619	0.81	+3.4
3,775,241	+		CCNA_03619	0.83	+3.2
3,775,247	-		CCNA_03619	0.83	-0.9
3,775,249	-		CCNA_03619	0.83	-2.2
3,775,249	-		CCNA_03619	0.83	-0.0
3,775,257	-		CCNA_03619	0.83	+1.0
3,775,289	+		CCNA_03619	0.85	+4.0
3,775,304	-		CCNA_03619	0.86	+1.2
3,775,320	+		CCNA_03619	0.86	+3.4
3,775,372	+		CCNA_03619	0.89	+3.7
3,775,377	+		CCNA_03619	0.89	+5.6
3,775,385	-		CCNA_03619	0.89	-1.0
3,775,385	-		CCNA_03619	0.89	+1.6
3,775,385	-		CCNA_03619	0.89	-0.7
3,775,385	-		CCNA_03619	0.89	+0.2
3,775,385	-		CCNA_03619	0.89	-0.5
3,775,410	+				+3.8
3,775,418	-				-1.8
3,775,421	+				+3.4
3,775,428	-				+0.5
3,775,435	-				+3.1
3,775,456	+				+3.4
3,775,464	-				-1.7
3,775,494	+				+3.6
3,775,497	-				+0.7
3,775,502	-				-0.3
3,775,518	+				+3.8
3,775,526	-				-1.5
3,775,571	+				+3.4
3,775,571	+				+3.6
3,775,571	+				+3.9
3,775,571	+				+3.8
3,775,571	+				+4.0
3,775,579	-				-0.0
3,775,579	-				-1.5
3,775,579	-				-0.7
3,775,579	-				-2.2
3,775,579	-				-0.0
3,775,638	-				-1.3
3,775,673	+				-0.4
3,775,681	-				+1.4
3,775,694	-				-0.7
3,775,696	+				+0.3
3,775,789	+		CCNA_03620	0.14	-0.8
3,775,796	-		CCNA_03620	0.15	+1.0
3,775,826	-		CCNA_03620	0.19	+0.7
3,775,861	-		CCNA_03620	0.23	+1.0
3,775,868	+		CCNA_03620	0.24	+1.6
3,775,876	-		CCNA_03620	0.25	-1.1
3,775,876	-		CCNA_03620	0.25	+0.7
3,775,876	-		CCNA_03620	0.25	-0.2
3,775,876	-		CCNA_03620	0.25	+1.3
3,775,948	-		CCNA_03620	0.34	+1.3
3,775,951	+		CCNA_03620	0.34	-0.2
3,775,956	+		CCNA_03620	0.35	+0.7
3,775,958	-		CCNA_03620	0.35	-0.3
3,775,959	-		CCNA_03620	0.35	+0.5
3,775,966	+		CCNA_03620	0.36	-1.1
3,776,020	+		CCNA_03620	0.43	-0.2
3,776,064	+		CCNA_03620	0.48	+0.5
3,776,072	-		CCNA_03620	0.49	+1.7
3,776,082	+		CCNA_03620	0.51	+1.1
3,776,133	+		CCNA_03620	0.57	-2.1
3,776,170	-		CCNA_03620	0.62	+0.3
3,776,234	+		CCNA_03620	0.70	+0.3
3,776,239	+		CCNA_03620	0.70	+2.0
3,776,242	-		CCNA_03620	0.71	-0.6
3,776,247	-		CCNA_03620	0.71	+0.2
3,776,247	-		CCNA_03620	0.71	-0.9
3,776,247	-		CCNA_03620	0.71	+1.3
3,776,411	+				+1.2
3,776,543	-				-3.5
3,776,543	-				-0.9
3,776,586	-				-1.7