Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03482

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,643,831	-		CCNA_03480	0.58	+0.8
3,643,898	+		CCNA_03480	0.66	-0.6
3,643,905	+		CCNA_03480	0.66	+1.8
3,643,905	+		CCNA_03480	0.66	+0.8
3,643,905	+		CCNA_03480	0.66	+0.4
3,643,905	-		CCNA_03480	0.66	-0.8
3,643,913	-		CCNA_03480	0.67	-0.1
3,643,913	-		CCNA_03480	0.67	+0.8
3,643,936	-		CCNA_03480	0.70	-1.2
3,643,936	-		CCNA_03480	0.70	+0.8
3,643,936	-		CCNA_03480	0.70	-2.2
3,643,974	+		CCNA_03480	0.75	-1.8
3,643,974	+		CCNA_03480	0.75	-1.6
3,643,982	-		CCNA_03480	0.75	-2.9
3,643,982	-		CCNA_03480	0.75	-1.8
3,643,985	+		CCNA_03480	0.76	-1.7
3,643,992	-		CCNA_03480	0.77	-0.2
3,644,007	-		CCNA_03480	0.78	-1.6
3,644,021	+		CCNA_03480	0.80	+0.0
3,644,021	+		CCNA_03480	0.80	-0.8
3,644,021	+		CCNA_03480	0.80	-0.1
3,644,021	+		CCNA_03480	0.80	-0.5
3,644,021	+		CCNA_03480	0.80	-0.1
3,644,021	+		CCNA_03480	0.80	-0.3
3,644,029	-		CCNA_03480	0.81	+1.3
3,644,029	-		CCNA_03480	0.81	-0.1
3,644,029	-		CCNA_03480	0.81	-1.0
3,644,029	-		CCNA_03480	0.81	-0.8
3,644,031	+		CCNA_03480	0.81	+0.4
3,644,037	+		CCNA_03480	0.82	+0.6
3,644,039	-		CCNA_03480	0.82	+0.4
3,644,092	+		CCNA_03480	0.88	+1.4
3,644,149	+				-2.4
3,644,149	+				+0.3
3,644,149	+				+1.6
3,644,157	-				-1.6
3,644,157	-				-0.8
3,644,157	-				+2.1
3,644,157	-				+2.0
3,644,186	+				+0.1
3,644,186	+				-0.6
3,644,190	+				-0.8
3,644,193	-				+0.4
3,644,219	+				-0.1
3,644,219	+				-1.7
3,644,227	-				-0.4
3,644,246	+				-1.2
3,644,327	+		CCNA_03481	0.10	+0.7
3,644,327	+		CCNA_03481	0.10	+1.2
3,644,327	+		CCNA_03481	0.10	+0.2
3,644,327	+		CCNA_03481	0.10	+0.6
3,644,335	-		CCNA_03481	0.12	+0.2
3,644,335	-		CCNA_03481	0.12	+0.2
3,644,337	+		CCNA_03481	0.13	+1.0
3,644,346	-		CCNA_03481	0.15	-2.1
3,644,431	+		CCNA_03481	0.33	+0.3
3,644,447	-		CCNA_03481	0.37	-0.4
3,644,447	-		CCNA_03481	0.37	-2.2
3,644,465	-		CCNA_03481	0.41	+1.4
3,644,471	-		CCNA_03481	0.42	+2.4
3,644,475	-		CCNA_03481	0.43	+0.4
3,644,505	+		CCNA_03481	0.50	-0.2
3,644,513	-		CCNA_03481	0.51	-1.7
3,644,518	+		CCNA_03481	0.53	+0.3
3,644,526	-		CCNA_03481	0.54	-0.9
3,644,541	-		CCNA_03481	0.58	-2.4
3,644,569	-		CCNA_03481	0.64	+2.1
3,644,577	+		CCNA_03481	0.66	-0.4
3,644,577	+		CCNA_03481	0.66	+1.5
3,644,577	+		CCNA_03481	0.66	-0.4
3,644,577	+				+1.8
3,644,577	+		CCNA_03481	0.66	+1.7
3,644,585	-		CCNA_03481	0.67	+0.2
3,644,585	-		CCNA_03481	0.67	-0.2
3,644,585	-		CCNA_03481	0.67	+0.7
3,644,585	-		CCNA_03481	0.67	+1.4
3,644,585	-		CCNA_03481	0.67	+0.1
3,644,585	-		CCNA_03481	0.67	-1.2
3,644,604	+		CCNA_03481	0.72	-0.0
3,644,700	+				+1.7
3,644,701	+				+0.9
3,644,701	+				+1.4
3,644,701	+				+1.8
3,644,712	+				+1.4
3,644,712	+				+1.9
3,644,762	+				-0.8
3,644,772	+				+1.4
3,644,799	+				-1.4
3,644,820	-				+2.7
3,644,821	-				+1.7
3,644,821	-				+0.5
3,644,828	-				+1.3
3,644,861	+				+0.8
3,644,895	-		CCNA_03482	0.10	+1.0
3,644,969	+		CCNA_03482	0.20	-0.2
3,644,987	-		CCNA_03482	0.23	+0.2
3,645,015	-		CCNA_03482	0.26	+0.1
3,645,018	+		CCNA_03482	0.27	+1.4
3,645,026	-		CCNA_03482	0.28	+1.9
3,645,040	+		CCNA_03482	0.30	+0.1
3,645,048	-		CCNA_03482	0.31	+1.0
3,645,078	-		CCNA_03482	0.35	+0.6
3,645,121	-				+3.4
3,645,123	+		CCNA_03482	0.40	-0.4
3,645,131	-		CCNA_03482	0.41	+1.1
3,645,131	-		CCNA_03482	0.41	+1.7
3,645,131	-		CCNA_03482	0.41	+2.0
3,645,131	-		CCNA_03482	0.41	+1.3
3,645,131	-		CCNA_03482	0.41	+1.5
3,645,131	-		CCNA_03482	0.41	-0.2
3,645,131	-		CCNA_03482	0.41	+2.4
3,645,131	-		CCNA_03482	0.41	+1.0
3,645,169	+		CCNA_03482	0.46	+0.8
3,645,177	-		CCNA_03482	0.48	-0.6
3,645,199	-		CCNA_03482	0.50	-0.2
3,645,230	-		CCNA_03482	0.54	+1.1
3,645,270	-		CCNA_03482	0.60	-0.4
3,645,270	-		CCNA_03482	0.60	+1.8
3,645,280	-		CCNA_03482	0.61	-0.0
3,645,280	-		CCNA_03482	0.61	+0.6
3,645,281	-		CCNA_03482	0.61	+1.5
3,645,296	+		CCNA_03482	0.63	-1.7
3,645,296	+		CCNA_03482	0.63	-0.9
3,645,296	+		CCNA_03482	0.63	-0.9
3,645,304	-		CCNA_03482	0.64	+0.7
3,645,312	-		CCNA_03482	0.65	-0.6
3,645,431	+		CCNA_03482	0.81	+1.4
3,645,471	+		CCNA_03482	0.86	+0.8
3,645,489	-		CCNA_03482	0.88	+0.4
3,645,502	-				+0.9
3,645,510	+				-0.2
3,645,554	+				-2.4
3,645,571	-				-0.6
3,645,583	+				-0.2
3,645,583	+				+0.4
3,645,591	-				+1.8
3,645,591	-				+1.2
3,645,606	+				+4.0
3,645,618	+				+1.1
3,645,626	-				-1.3
3,645,626	-				+0.4
3,645,636	-				+0.0
3,645,636	-				+0.7
3,645,636	-				+3.4
3,645,636	-				+1.0
3,645,720	+		CCNA_03483	0.16	-0.6
3,645,720	+		CCNA_03483	0.16	-1.9
3,645,723	-		CCNA_03483	0.16	-2.2
3,645,733	-		CCNA_03483	0.17	+1.5
3,645,744	-		CCNA_03483	0.18	+0.4
3,645,747	+		CCNA_03483	0.18	-0.9
3,645,757	+		CCNA_03483	0.19	+1.4
3,645,770	-		CCNA_03483	0.21	-0.1
3,645,770	-		CCNA_03483	0.21	+0.4
3,645,782	-		CCNA_03483	0.22	-0.5
3,645,844	+		CCNA_03483	0.29	-2.4
3,645,844	+		CCNA_03483	0.29	-1.3
3,645,844	+		CCNA_03483	0.29	-0.9
3,645,844	+		CCNA_03483	0.29	+1.4
3,645,852	-		CCNA_03483	0.30	+0.7
3,645,852	-		CCNA_03483	0.30	-0.4
3,645,852	-		CCNA_03483	0.30	-0.0
3,645,852	-		CCNA_03483	0.30	+0.6
3,645,852	-		CCNA_03483	0.30	+1.3
3,645,865	+		CCNA_03483	0.31	-0.8
3,645,874	+		CCNA_03483	0.32	+0.8
3,645,877	-		CCNA_03483	0.32	-1.3
3,645,911	-		CCNA_03483	0.36	-0.7
3,645,922	-		CCNA_03483	0.37	-0.3
3,645,922	-		CCNA_03483	0.37	+0.6
3,645,935	+		CCNA_03483	0.38	+1.7
3,645,985	+		CCNA_03483	0.44	-2.1
3,646,007	+		CCNA_03483	0.46	+0.1
3,646,087	+		CCNA_03483	0.54	-1.9
3,646,087	-		CCNA_03483	0.54	+0.1
3,646,107	-		CCNA_03483	0.57	-0.5
3,646,107	-		CCNA_03483	0.57	+1.8
3,646,130	+		CCNA_03483	0.59	-2.0
3,646,205	+		CCNA_03483	0.67	+0.1
3,646,209	+		CCNA_03483	0.67	-2.0
3,646,217	-		CCNA_03483	0.68	+1.4
3,646,217	-		CCNA_03483	0.68	-0.8
3,646,217	-		CCNA_03483	0.68	+0.8
3,646,227	-		CCNA_03483	0.69	+1.6
3,646,269	-		CCNA_03483	0.74	+1.1
3,646,295	+		CCNA_03483	0.76	-0.6
3,646,321	-		CCNA_03483	0.79	-0.0
3,646,342	+		CCNA_03483	0.81	-0.2
3,646,349	-		CCNA_03483	0.82	+0.6
3,646,359	-		CCNA_03483	0.83	+0.0
3,646,373	-		CCNA_03483	0.85	-0.9
3,646,373	-		CCNA_03483	0.85	+0.3
3,646,409	-		CCNA_03483	0.88	+0.3
3,646,420	-		CCNA_03483	0.90	+0.8
3,646,470	-				+0.4
3,646,476	-				+0.4
3,646,507	+				-1.3
3,646,512	+				-1.1
3,646,515	-				+0.5
3,646,532	+				-0.4
3,646,542	+				+0.8
3,646,547	+				+1.1
3,646,550	-				+2.4
3,646,550	-				+2.0
3,646,557	+				-1.1
3,646,557	+				-2.7
3,646,557	+				+0.1
3,646,557	+				+0.0
3,646,557	+				+1.9
3,646,565	-				+0.1
3,646,565	-				-0.8
3,646,565	-				+0.4