Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03176

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,334,169	+		CCNA_03174	0.54	-0.6
3,334,190	+		CCNA_03174	0.55	-0.7
3,334,197	+		CCNA_03174	0.56	-0.1
3,334,205	-		CCNA_03174	0.56	+2.7
3,334,213	+		CCNA_03174	0.57	-0.9
3,334,232	+		CCNA_03174	0.58	+0.3
3,334,239	-		CCNA_03174	0.59	+0.1
3,334,249	+		CCNA_03174	0.59	+1.0
3,334,257	-		CCNA_03174	0.60	-2.2
3,334,373	-		CCNA_03174	0.68	-1.5
3,334,384	-		CCNA_03174	0.69	+0.4
3,334,472	-		CCNA_03174	0.76	-1.1
3,334,493	+		CCNA_03174	0.77	-0.5
3,334,505	-		CCNA_03174	0.78	-1.3
3,334,522	-		CCNA_03174	0.79	-1.7
3,334,525	-		CCNA_03174	0.79	-2.6
3,334,534	+		CCNA_03174	0.80	-0.4
3,334,535	+		CCNA_03174	0.80	-2.2
3,334,607	-		CCNA_03174	0.85	+0.7
3,334,681	+				-1.6
3,334,686	+				-0.0
3,334,688	+				-2.4
3,334,696	-				-0.4
3,334,696	-				-0.1
3,334,704	+				+0.3
3,334,714	+				-1.1
3,334,725	+				+0.1
3,334,743	+				+1.3
3,334,751	-				-0.1
3,334,773	-				-1.4
3,334,803	+				+0.1
3,334,803	+				-0.1
3,334,803	+				+0.0
3,334,811	-				-0.6
3,334,896	-		CCNA_03175	0.22	+2.9
3,334,901	+		CCNA_03175	0.23	+1.9
3,334,948	+		CCNA_03175	0.35	-0.3
3,334,948	+		CCNA_03175	0.35	+1.1
3,334,948	+		CCNA_03175	0.35	-0.7
3,334,956	-		CCNA_03175	0.37	-0.3
3,334,956	-		CCNA_03175	0.37	+0.5
3,334,956	-		CCNA_03175	0.37	-0.9
3,334,996	+		CCNA_03175	0.47	-1.5
3,335,002	-		CCNA_03175	0.48	+1.1
3,335,004	-		CCNA_03175	0.49	-1.6
3,335,043	-		CCNA_03175	0.59	+0.4
3,335,056	+		CCNA_03175	0.62	+1.1
3,335,064	-		CCNA_03175	0.64	+1.1
3,335,075	-		CCNA_03175	0.66	-1.3
3,335,152	+		CCNA_03175	0.85	+0.7
3,335,152	+		CCNA_03175	0.85	+0.1
3,335,160	-				+1.4
3,335,160	-				-0.6
3,335,176	-				+0.1
3,335,195	+				+0.1
3,335,195	+				+0.7
3,335,195	+				+2.7
3,335,203	-				+1.7
3,335,203	-				+2.0
3,335,208	-				-0.4
3,335,236	+		CCNA_03176	0.28	+0.7
3,335,244	-		CCNA_03176	0.31	+1.1
3,335,244	-		CCNA_03176	0.31	+0.7
3,335,256	-		CCNA_03176	0.35	+2.5
3,335,275	+		CCNA_03176	0.41	-0.7
3,335,283	-		CCNA_03176	0.44	+0.7
3,335,311	-		CCNA_03176	0.54	+0.7
3,335,329	+		CCNA_03176	0.60	-0.1
3,335,357	+		CCNA_03176	0.69	+1.1
3,335,360	-		CCNA_03176	0.70	+0.3
3,335,430	-				+0.2
3,335,479	-				+0.1
3,335,487	+				+1.7
3,335,490	-				-0.7
3,335,495	+				-1.1
3,335,500	+				-0.3
3,335,503	-				-0.7
3,335,503	-				+0.9
3,335,519	+				-1.0
3,335,527	-				-0.7
3,335,527	-				+0.7
3,335,542	+				+0.4
3,335,542	+				+0.1
3,335,542	+				+0.4
3,335,550	-				+2.3
3,335,591	-				-0.3
3,335,709	+		CCNA_03177	0.12	+1.6
3,335,787	+		CCNA_03177	0.16	-2.0
3,335,818	+		CCNA_03177	0.17	-0.6
3,335,823	+		CCNA_03177	0.18	+1.7
3,335,823	+		CCNA_03177	0.18	-0.1
3,335,826	-		CCNA_03177	0.18	-0.7
3,335,839	-		CCNA_03177	0.18	+1.1
3,335,839	-		CCNA_03177	0.18	+1.1
3,335,839	-		CCNA_03177	0.18	-0.3
3,335,867	+		CCNA_03177	0.20	-1.0
3,335,867	+		CCNA_03177	0.20	-0.9
3,335,867	+		CCNA_03177	0.20	-0.3
3,335,875	-		CCNA_03177	0.20	-0.1
3,335,875	-		CCNA_03177	0.20	+1.1
3,335,875	-		CCNA_03177	0.20	+2.1
3,335,892	+		CCNA_03177	0.21	+1.2
3,335,932	-		CCNA_03177	0.23	-0.8
3,335,969	-		CCNA_03177	0.25	+1.8
3,335,997	-		CCNA_03177	0.26	-0.6
3,336,004	-		CCNA_03177	0.27	-1.0
3,336,008	+		CCNA_03177	0.27	-0.0
3,336,016	-		CCNA_03177	0.27	-0.7
3,336,016	-		CCNA_03177	0.27	-2.8
3,336,069	-		CCNA_03177	0.30	-0.8
3,336,094	+		CCNA_03177	0.31	-0.0
3,336,100	-		CCNA_03177	0.32	+1.2
3,336,138	+		CCNA_03177	0.33	+0.6
3,336,149	+		CCNA_03177	0.34	-0.2
3,336,149	+		CCNA_03177	0.34	+0.8
3,336,149	+		CCNA_03177	0.34	-0.4
3,336,157	-		CCNA_03177	0.34	+1.3
3,336,157	-		CCNA_03177	0.34	+0.2
3,336,162	+		CCNA_03177	0.35	+2.8
3,336,210	+		CCNA_03177	0.37	+1.8
3,336,249	+		CCNA_03177	0.39	+0.2
3,336,277	+		CCNA_03177	0.40	-0.4
3,336,285	-		CCNA_03177	0.41	-0.6
3,336,317	+		CCNA_03177	0.42	+0.2
3,336,392	+		CCNA_03177	0.46	-0.2
3,336,392	+		CCNA_03177	0.46	-0.6
3,336,392	+		CCNA_03177	0.46	-0.4
3,336,400	-		CCNA_03177	0.47	-1.2
3,336,400	-		CCNA_03177	0.47	+1.5
3,336,400	-		CCNA_03177	0.47	+1.8
3,336,400	-		CCNA_03177	0.47	-1.2
3,336,400	-		CCNA_03177	0.47	-1.4
3,336,400	-		CCNA_03177	0.47	+1.2
3,336,400	-		CCNA_03177	0.47	+0.4
3,336,411	+		CCNA_03177	0.47	+0.8
3,336,426	+		CCNA_03177	0.48	-0.0
3,336,442	-		CCNA_03177	0.49	+1.3