Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03043

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,197,540	-		CCNA_03041	0.88	+4.1
3,197,541	-		CCNA_03041	0.88	+1.4
3,197,571	-				+2.6
3,197,583	-				-1.7
3,197,583	-				+1.1
3,197,599	+				-0.9
3,197,612	-				+1.7
3,197,614	+				-0.7
3,197,622	-				+2.6
3,197,644	+				+1.7
3,197,659	+				-0.6
3,197,659	+				+0.5
3,197,659	+				-0.6
3,197,659	+				+0.5
3,197,659	+				-0.4
3,197,659	+				-0.8
3,197,659	+				-2.0
3,197,659	+				-0.2
3,197,659	+				-0.1
3,197,660	-				+1.1
3,197,660	-				+1.1
3,197,667	-				+0.9
3,197,667	-				-0.9
3,197,667	-				+0.6
3,197,667	-				+1.7
3,197,673	-				-0.9
3,197,731	+				+0.7
3,197,760	-				+1.9
3,197,760	-				+2.1
3,197,760	-				+2.3
3,197,818	-				+0.1
3,197,822	+				+0.7
3,197,822	+				+1.1
3,197,830	-				+2.0
3,197,830	-				-1.1
3,197,847	-				+1.1
3,197,847	-				-1.0
3,197,854	+				+3.3
3,197,862	-				+1.0
3,197,911	+		CCNA_03042	0.15	-0.9
3,197,911	+		CCNA_03042	0.15	+0.1
3,197,914	-		CCNA_03042	0.15	+0.2
3,197,914	-		CCNA_03042	0.15	-0.4
3,197,914	-		CCNA_03042	0.15	-0.2
3,197,919	-		CCNA_03042	0.16	+0.8
3,197,919	-		CCNA_03042	0.16	+1.7
3,197,946	+		CCNA_03042	0.21	-1.0
3,197,976	-		CCNA_03042	0.27	+1.9
3,197,981	-		CCNA_03042	0.28	+0.8
3,198,010	+		CCNA_03042	0.34	+0.4
3,198,010	+		CCNA_03042	0.34	-0.7
3,198,010	+		CCNA_03042	0.34	+2.7
3,198,010	+		CCNA_03042	0.34	-1.8
3,198,010	+		CCNA_03042	0.34	+0.4
3,198,010	+		CCNA_03042	0.34	+1.1
3,198,018	-		CCNA_03042	0.35	-0.2
3,198,018	-		CCNA_03042	0.35	+1.6
3,198,018	-		CCNA_03042	0.35	+2.1
3,198,018	-		CCNA_03042	0.35	+2.1
3,198,018	-		CCNA_03042	0.35	-1.1
3,198,018	-		CCNA_03042	0.35	+2.4
3,198,018	-		CCNA_03042	0.35	+0.3
3,198,035	+		CCNA_03042	0.39	+0.7
3,198,042	+		CCNA_03042	0.40	-0.4
3,198,049	+		CCNA_03042	0.42	-0.9
3,198,049	+		CCNA_03042	0.42	-0.4
3,198,085	-		CCNA_03042	0.49	-0.1
3,198,094	+		CCNA_03042	0.50	+0.4
3,198,119	-		CCNA_03042	0.55	+1.3
3,198,137	+		CCNA_03042	0.59	+3.7
3,198,137	+		CCNA_03042	0.59	-0.1
3,198,138	-		CCNA_03042	0.59	-0.6
3,198,145	-		CCNA_03042	0.60	+1.6
3,198,145	-		CCNA_03042	0.60	+0.1
3,198,147	+		CCNA_03042	0.61	+0.7
3,198,151	-		CCNA_03042	0.61	-0.4
3,198,174	+		CCNA_03042	0.66	+0.4
3,198,182	-		CCNA_03042	0.67	+0.1
3,198,187	-		CCNA_03042	0.68	+1.7
3,198,198	+		CCNA_03042	0.71	-0.1
3,198,203	+		CCNA_03042	0.72	+1.1
3,198,203	+		CCNA_03042	0.72	+0.7
3,198,203	+		CCNA_03042	0.72	-0.1
3,198,211	-		CCNA_03042	0.73	-0.7
3,198,211	-		CCNA_03042	0.73	+1.4
3,198,211	-		CCNA_03042	0.73	+0.7
3,198,216	-		CCNA_03042	0.74	+0.0
3,198,230	+		CCNA_03042	0.77	+0.4
3,198,235	+		CCNA_03042	0.78	-0.4
3,198,248	-				+0.7
3,198,274	+		CCNA_03042	0.85	-1.3
3,198,296	+		CCNA_03042	0.90	-0.9
3,198,300	-				-0.4
3,198,309	-				-1.6
3,198,314	-				+1.1
3,198,331	+				+1.1
3,198,331	+				-0.7
3,198,331	+				-2.2
3,198,339	-				+0.1
3,198,367	-				+0.0
3,198,376	+				-2.1
3,198,389	-				+2.7
3,198,474	-				+0.4
3,198,478	+				+1.7
3,198,491	+				+0.1
3,198,521	+				+1.1
3,198,529	-				+3.8
3,198,587	-		CCNA_03043	0.36	+3.6
3,198,587	-				+4.0
3,198,591	+		CCNA_03043	0.38	+0.4
3,198,591	-		CCNA_03043	0.38	-1.3
3,198,635	-		CCNA_03043	0.62	+4.2
3,198,637	-		CCNA_03043	0.63	+4.6
3,198,647	-		CCNA_03043	0.69	+4.4
3,198,672	-		CCNA_03043	0.83	+3.8
3,198,705	-				+4.6
3,198,706	-				+4.1
3,198,713	+				+1.1
3,198,719	-				+4.4
3,198,725	-				+5.1
3,198,725	-				+4.4
3,198,750	-				+3.9
3,199,015	+				-0.6
3,199,015	+				-1.4
3,199,086	-		CCNA_03044	0.16	+1.4
3,199,086	-		CCNA_03044	0.16	+2.7
3,199,092	-		CCNA_03044	0.17	-1.0
3,199,122	-		CCNA_03044	0.24	+0.4
3,199,134	+		CCNA_03044	0.27	+1.1
3,199,147	+		CCNA_03044	0.30	+0.7
3,199,157	+		CCNA_03044	0.32	-0.1
3,199,166	+		CCNA_03044	0.34	+0.6
3,199,170	-		CCNA_03044	0.35	-0.4
3,199,170	-		CCNA_03044	0.35	-0.1
3,199,190	+		CCNA_03044	0.40	+0.6
3,199,190	+		CCNA_03044	0.40	+0.7
3,199,190	+		CCNA_03044	0.40	+0.1
3,199,198	-		CCNA_03044	0.41	-1.0
3,199,223	+		CCNA_03044	0.47	-0.6
3,199,228	+		CCNA_03044	0.48	+0.7
3,199,236	-		CCNA_03044	0.50	+2.9
3,199,254	+		CCNA_03044	0.54	+1.1
3,199,267	-		CCNA_03044	0.57	+0.4
3,199,363	+		CCNA_03044	0.80	+0.7
3,199,401	-		CCNA_03044	0.88	+1.7
3,199,404	+		CCNA_03044	0.89	+1.0
3,199,407	-				-0.9
3,199,409	+				-0.7
3,199,414	+				+1.4
3,199,414	+				-2.4
3,199,428	+				+2.7
3,199,429	-				+1.8
3,199,432	+				+1.5
3,199,433	+				+0.6
3,199,435	-				+0.7
3,199,441	-				+0.4
3,199,465	+				+3.7
3,199,465	+				-0.6
3,199,465	+				-1.5
3,199,486	+				+0.3
3,199,489	-				+1.1
3,199,494	-				-0.1
3,199,494	-				-0.1
3,199,524	+				+2.5
3,199,539	+				-1.2
3,199,564	-				+2.5
3,199,566	-				-0.1
3,199,581	-				+1.1
3,199,693	+		CCNA_03045	0.27	+0.6